| New model in OGS2.0 | DPOGS208186 |
|---|---|
| Genomic Position | scaffold896:+ 11764-24849 |
| See gene structure | |
| CDS Length | 1296 |
| Paired RNAseq reads | 326 |
| Single RNAseq reads | 975 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010121 (9e-147) |
| Best Drosophila hit | RhoGAP71E, isoform B (3e-116) |
| Best Human hit | rho GTPase-activating protein 20 (4e-17) |
| Best NR hit (blastp) | PREDICTED: similar to RhoGAP71E CG32149-PA [Tribolium castaneum] (2e-154) |
| Best NR hit (blastx) | PREDICTED: similar to RhoGAP71E CG32149-PA [Tribolium castaneum] (4e-144) |
| GeneOntology terms | GO:0005622 intracellular GO:0007165 signal transduction |
| InterPro families | IPR000198 Rho GTPase-activating protein domain IPR008936 Rho GTPase activation protein |
| Orthology group | MCL15171 |
Nucleotide sequence:
ATGAGCAACTGGGCGAGGCGAATGCACCGGCGAGCTGCAACATTAAGCAATGTGGTCACA
TCTTGTGGTCATCCGAACTCCTTGCCGTATCCACGGAGACTTGAGAAAGTTAAATTCGGT
GTTCCTCTGAGTGAAGTGTGCAAGGACGATATACCAGGACCTTTGTTGGTGCTGATTTTG
AAATTGAACAAGGAAGCGCCTTTACGCCGCGATGTTTTTCGAGCGCCTGGACACCAAGGT
GCTATGAAGAAACTCATTCACTTCTTGCAAACAGGTCGCCTGGTTAACGTCGACAATTAC
TCCGTTTACACTATAGCTAGTGTTCTCAAGAAGTTCCTTAGGAAAATACCAGGGGGTGTG
TTTGGAAGGGATGGTGAGATGCACTTGTTTGCTGCAGTGGAGCTCCCGGGGGAACAACAG
ACCGATGCTATAAGGAGACAGATATTGTCGCTGCCCGTGTGCACTCAGAGATTGTTGGTG
CTACTTTTCGGCACATTCCGTGTTATGGCTTCAAACGCCGACAAAGCTGGAACTGGCATG
ACATCGGAAGCCCTGGGCGTGTCAGTCGCACCATCGTTCTTCCACTCATGCGTATCAGAT
GGGAAGACAGCTACCATGGAAGATGTACAACGTTTCAAGGTCGCAACACGTGTGATGCGT
CAGCTGATAGAGCAGTTTAGTGCTGGCGATCTGTTCGGTAGAGAGAACTATGAGTACTAC
GCGAGGGTGACGGGGAGGGTGCTGAGGGTGAGGGATGAATGGATCTGTTCCTTCAGGGAC
CCGCCGCCGCCGAGACACCATCAGGACCAGGAGGCATATGCCAGTCTATCAAAGTCCGAG
GAGTGTCAATCAATGCCGGCCTTGATGGGTGCTGTGGGTGGTACTGGCGCTTCCACTGGT
CTTGGTATCATACCAGAACATAGTCTGCTCGACTCATGCACCAGACTCTCTATATCGCTG
GAGGAGAGCATCTTTAAGGTGTCTGTGAGTTCCTCTTCACAGTCATCTCGCAGTAACTCC
AGCCCTCACATGACCCTGGAGGAACTGCGCGCCATCAACAAGTATGCTGAGAGTACGAAG
AGCCTCTCATACCTGCCTCAGGTGCACGAGCGGCAGCGGGCGCGGATGAGGACGCGCTCG
GAGTGGTTCCTGCAGCCCGCTGTTTCTCTGGACGCCCGCCCGCGCGCAAGCGGGTCGCGT
CGTCGATCGAGGCGCGCGCGCATGTGCCGCGCGCACACGCATTCAGACACTGAGGTGCCG
CTCGCTATCCAGCCTCGTCAAGTGACGGCCAGGTAA
Protein sequence:
MSNWARRMHRRAATLSNVVTSCGHPNSLPYPRRLEKVKFGVPLSEVCKDDIPGPLLVLIL
KLNKEAPLRRDVFRAPGHQGAMKKLIHFLQTGRLVNVDNYSVYTIASVLKKFLRKIPGGV
FGRDGEMHLFAAVELPGEQQTDAIRRQILSLPVCTQRLLVLLFGTFRVMASNADKAGTGM
TSEALGVSVAPSFFHSCVSDGKTATMEDVQRFKVATRVMRQLIEQFSAGDLFGRENYEYY
ARVTGRVLRVRDEWICSFRDPPPPRHHQDQEAYASLSKSEECQSMPALMGAVGGTGASTG
LGIIPEHSLLDSCTRLSISLEESIFKVSVSSSSQSSRSNSSPHMTLEELRAINKYAESTK
SLSYLPQVHERQRARMRTRSEWFLQPAVSLDARPRASGSRRRSRRARMCRAHTHSDTEVP
LAIQPRQVTAR