| New model in OGS2.0 | DPOGS200999 |
|---|---|
| Genomic Position | scaffold601:- 50171-56837 |
| See gene structure | |
| CDS Length | 3060 |
| Paired RNAseq reads | 1480 |
| Single RNAseq reads | 3527 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009069 (2e-89) |
| Best Drosophila hit | CG9004 (5e-94) |
| Best Human hit | nucleolar MIF4G domain-containing protein 1 (1e-86) |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (3e-150) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (6e-124) |
| GeneOntology terms | GO:0016070 RNA metabolic process GO:0005515 protein binding GO:0005730 nucleolus |
| InterPro families | IPR003891 Initiation factor eIF-4 gamma, MA3 IPR016024 Armadillo-type fold IPR003890 MIF4G-like, type 3 IPR016021 MIF4-like, type 1/2/3 |
| Orthology group | MCL13590 |
Nucleotide sequence:
ATGAAAAAACCAAATAATAAGCCAAAATTTACAAATACACGTAAAGTGCTTCGAAAACAA
AAGAGACAAGAAAAGAAAGTAAAACGGAAAGAACATTATTTAAAAAAGAATATAGATTCT
ACTGAGCTTCACCGGTCCACCTCACCGGGAAAGTTTGTAAAAATAAGACCCGAAACATCT
GAACCTGATAATGTGGTTAAGAAAAATAAAAAACCAAAAAATCCGCCTACTGTTCAAGAA
TTATTAAAATTGGAGCAAGAAAAAGAGAAGAGAGCCACTGATAAATTAAAATCGATGATG
AATGAACAAAGAAGGAAGATGTTATTGGAAGCTAATGATGCGGAGGATAAGATTATTAAG
AAGCTAGAGAAACAGCTCGGCTTGAACAAGACTCGAAACAAAAATAACTTTTTTGCTGAC
GATGGGCTGGATTATTTACTAGAGGTGTGTGATAGAACGACGTCAGAACAAATTGTGGCA
GCGGAAAAACATTTGGCTGAAGTTGAAAGAGATTCCGACTTTGAAGATGATTTGGCTGCG
GTTACAGGAAAAGAGCCACATCGTAAAAAGGAAAAGGAAAAAGAGATAACAGAAGACGGA
CATGATTCAGTTGATGATATGGATGAAGATGATGAGTTAGGAAGTGATGATGATATGCTG
GGTGAAGACAGTGAAATGAGTGAAGATGGAACCGATTTTAAAGATAATGGTGAGTCTGAT
GATGATGGAGAAACTGGTGATGATGGAGAAGATGACAGTGAAGATGATGGTGATGAAGAA
CCAGAACGAAAAAAAAGATCAAATAACAAGAACAATAACAAGACAAAGGAAAAGATAATT
GCAGAAGAAGATTTGAGTAAAATATTTAGTGACGATGAAGTGTCACATTTATCCGATGAT
GAAGAGTTGAGCGGAGGTGAAGAGAATTCAGAAATAGAACCTAAAGAGAAGCCGGATGTA
TGGGAGGACATTTATGGAAGGAAGAGAGATAAAGAAGGGAACATCATTAAGGAGGAAAAA
GGCATTTACATCCCACCACATTTGAGGAACAAGGACTCAACATCTGAGAAGGAGATGGCA
CAACTGAAACGGCAAGTTAAAAGTGTTCTGAACAAGTTGGCTGGTACAAACCTTCACTGG
GCTTGCACCAGTATAGAGAATCTGTACACCAGCAACAGCAGACACTCGATGAATACAGTA
TTGACATCGCTGTATATGGAGGGAGTCGTTGGAAGGTCTATGACTCCGGAGAGGATGCTG
GCAGAACATGCGGCTATGATAGCTGTGTTGCATGCCAATGTTGGCTCCGAAATTGGAGCA
CATTTCTTGGAGGAGTTGTGTAAGAGGTTTGACGCAATGATGGACACACCACAACCAGTC
GAGGACAAGACCTTAGACAATCTAGTTGCTTGCTTGGCACATTTGTTTTGTTTCAAGTTG
TACCAATCTACGTTACTATTCGATATTCTGTCGCGTCTGACGCACACGTTGTCCGAGAAG
TGCATAGACGTGTTGTTAGTGTGCGTGAGGTGCGCCGGCGCAGCTCTAAGGAAGGAAGCG
CCTCTCGAACTCAAGACCTTCATACATGACACACAGGCTCGGAGTACCAAGATAGGGGCT
GGTGTGACAGACGGGTCCCGTATAAAGTTTCTACTAGAAGTACTGCTGGCTATTAAGAAT
AATAATTTAAACAAAATACCCAACTACGATCCGAGCTACGTGGAACACCTGAAGAAGATG
ACTCGGAGTATTGTCAGGAAAGGAAATTATATAACACCCTTGAACATACGGCTGGAGGAT
CTATTGAAAGCCCAGGAACGCGGCAAGTGGTGGGTGGTCGGGTCGGCCTGGGAGGGGCAG
GCTGAGGTCGGAGACAAACAGACAGAGAAACAGACAACGCACGCTGACCAGAGAATGATG
GAACTGGCGAGGAAACAGAGAATGAATACCGATGTCAGGCGGAGCATCTTCTGTGTTATT
ATGTCTGCTGAGGACTACATGGACGCCTTTTCTAAGTTGGAACAGCTCTCCTTGAAGGGA
CAACAGCAGCGTGAGATATCGCATGTGTTGTTGTCTTGCTCTCTCCATGAGAAGGCTTAC
AACCCCTACTACAGTGTGCTGGCTGACAAACTGTGCAGTGTAGATAGGAAATATCAGCTA
TCAATACAGTACTCTGTGTGGGACAAAATAAAGGAAATTGAAACTCTATCCAAACAGTCA
ATGACCAACTTGGCACAGTTTCTCATCCATCTGTTTGTATCCAAAGCACTGCCGCTGTCC
ATTCTCAAGGAACGCGGCAAGTGGTGGGTGGTCGGGTCGGCCTGGGAGGGGCAGGCTGAG
GTCGGAGACAAACAGACAGACAAACAGACAACGCACGCTGACCAGAGAATGATGGAACTG
GCGAGGAAACAGAGAATGAATACCGATGTCAGGCGGAGCATCTTCTGTGTTATTATGTCT
GCTGAGGACTACATGGACGCCTTTTCTAAGTTGGAACAGCTCTCCTTGAAGGGACAACAG
CAGCGTGAGATATCGCATGTGTTGTTGTCTTGCTCTCTCCATGAGAAGGCCTACAACCCC
TACTACAGTGTGCTGGCTGACAAACTGTGCAGTGTAGATAGGAAATATCAGCTATCAATA
CAGTACTCTGTGTGGGACAAAATAAAGGAAATTGAAACTCTATCCAAACAGTCAACGACC
AACTTGGCACAGTTTCTCATCCATCTGTTTATATCCAAAGCACTGCCGCTGTCCATTCTC
AAGATAATCCAATTCTCCGATTTAAACAAGAAGACCGTCCGGTTCATGAGACAGATACTC
CTGGCTGTCATAATGAATGATAACTTGCAAGCGTCGCTGGAAGTGTTCCACAGGATAGCC
AAACCCCCGAAGCTGCACATGTTTAGGGAGAGTCTGAGGTTATTCATTCAGCACTTCCTA
ATAAAGAACGCCGGCAAGCAGAGCGCGGTGTTGAGTGAAGAGGAGATGAGGACCTTGAGG
GAACGGGCACAGGAAGTTGATAAGATTCTCACCATGCACGAAACTAAATTGAGATTTTGA
Protein sequence:
MKKPNNKPKFTNTRKVLRKQKRQEKKVKRKEHYLKKNIDSTELHRSTSPGKFVKIRPETS
EPDNVVKKNKKPKNPPTVQELLKLEQEKEKRATDKLKSMMNEQRRKMLLEANDAEDKIIK
KLEKQLGLNKTRNKNNFFADDGLDYLLEVCDRTTSEQIVAAEKHLAEVERDSDFEDDLAA
VTGKEPHRKKEKEKEITEDGHDSVDDMDEDDELGSDDDMLGEDSEMSEDGTDFKDNGESD
DDGETGDDGEDDSEDDGDEEPERKKRSNNKNNNKTKEKIIAEEDLSKIFSDDEVSHLSDD
EELSGGEENSEIEPKEKPDVWEDIYGRKRDKEGNIIKEEKGIYIPPHLRNKDSTSEKEMA
QLKRQVKSVLNKLAGTNLHWACTSIENLYTSNSRHSMNTVLTSLYMEGVVGRSMTPERML
AEHAAMIAVLHANVGSEIGAHFLEELCKRFDAMMDTPQPVEDKTLDNLVACLAHLFCFKL
YQSTLLFDILSRLTHTLSEKCIDVLLVCVRCAGAALRKEAPLELKTFIHDTQARSTKIGA
GVTDGSRIKFLLEVLLAIKNNNLNKIPNYDPSYVEHLKKMTRSIVRKGNYITPLNIRLED
LLKAQERGKWWVVGSAWEGQAEVGDKQTEKQTTHADQRMMELARKQRMNTDVRRSIFCVI
MSAEDYMDAFSKLEQLSLKGQQQREISHVLLSCSLHEKAYNPYYSVLADKLCSVDRKYQL
SIQYSVWDKIKEIETLSKQSMTNLAQFLIHLFVSKALPLSILKERGKWWVVGSAWEGQAE
VGDKQTDKQTTHADQRMMELARKQRMNTDVRRSIFCVIMSAEDYMDAFSKLEQLSLKGQQ
QREISHVLLSCSLHEKAYNPYYSVLADKLCSVDRKYQLSIQYSVWDKIKEIETLSKQSTT
NLAQFLIHLFISKALPLSILKIIQFSDLNKKTVRFMRQILLAVIMNDNLQASLEVFHRIA
KPPKLHMFRESLRLFIQHFLIKNAGKQSAVLSEEEMRTLRERAQEVDKILTMHETKLRF