| New model in OGS2.0 | DPOGS208594 |
|---|---|
| Genomic Position | scaffold1483:+ 26831-31671 |
| See gene structure | |
| CDS Length | 1641 |
| Paired RNAseq reads | 91 |
| Single RNAseq reads | 246 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013376 (5e-109) |
| Best Drosophila hit | CG33978 (3e-26) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to CG33978 CG33978-PA [Tribolium castaneum] (5e-122) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC006727 [Tribolium castaneum] (1e-116) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR000082 SEA IPR000742 Epidermal growth factor-like, type 3 IPR013091 EGF calcium-binding IPR001881 EGF-like calcium-binding IPR006210 Epidermal growth factor-like IPR000152 EGF-type aspartate/asparagine hydroxylation site IPR013032 EGF-like region, conserved site IPR018097 EGF-like calcium-binding, conserved site |
| Orthology group | MCL17829 |
Nucleotide sequence:
ATGAAGTGCGTGTGCAGACCAGGCTTCGCTAGAATGTTCCCAGATCGACCGTGTAAACCA
ACGTATACGTACTCCGTAAGATTAGGACTGGGGTCTAGAGATAACAAGGTGCTCAAATTC
CATAAAAGTCTATCGGACAATTCTACTAAAGAATATGAGAGTTTGTCATTGGCTACTCAT
GAAGGAATAAATCGAATGATTATGCAATCAGACTTAAGGGATGTTTATCACGGAGTCCAC
ATAACAGGATTCCATCCTATTGAGATGAGAACAAAAGACGGAGCCTATCAGGGTGTTATC
AATGATTTCTACGTCCAGCTTTCCGATAACGCCCATGAAAGTAGACTGAAGGAAGTGATA
GAGAAATATCTACGGAATAATAACTATAGCCTTGGTGGAACAGAAGTTTATGCATCTGAA
GAATTTATTGAAAGCCTTAATGTCAGCGATTTCGACGAATGCACGAGCACTCAGTTCAAT
GACTGTTCCGAACACGCCCGCTGTTTCAACCTTCGCGGAACTTACACTTGCAGTTGTTTA
GAAGGTTTTGCGGACCTCAGTGTCAACACTCTATACCCTGGGAGGATATGTTCTTCTGAC
GCAATAGGCTGTGCAGGCTGCAACTATCATGGCACGTGCTTCGATCGTGAGAACGCGATG
ATTTGCGAATGTTTCAAGTGGTACGCGGGACGAACTTGCCAGGTCAATTTGAAAGCTGTT
TTGATAACAGTCACCGTGGTAGGGGCGCTGGTCATCATAGTGGTGACGATCTGGGCGTCG
AAGAGATGCTGCAGTCAGAAGAATCCCACGAATCAAACGTTTGTTATAGGTTGCATGCAA
GGAATGCCAAGTTTACATCAGGGTAACGTACCATCAAAGCAGAGAGCTGACAGACGAGCA
TTAATTGCTGAAAGAAATGAAACAGCAGAGACATGTAGCGTGCAAAATGCTTCACTACCT
TACGCGCCGTCAAAATCTCGGTCGCGATCACACAGTAAGCAGGCGCCGGAGCCTCCTCCT
CACTCCCCACCTCCGCCGCCCGCCCTAATGATACCACGTGCAAGACTACATCCACTACAT
GACAGTCGCGATAATTTGTCACGTAGGAAGAGTAGCGAAGTGTGTAACGAAGCTAAACTT
ATCAGTTACTTGGAATCGGGAGCGACAAACACTCAGGAGATGCGGAGAAAACACAGCATT
GAATCATCGTACAGTGTAAATAAAGAGAGAGCTAATAAACAAGGTGCACTTGTATCAGCT
GGTTATAAAGTTTCAACGACCATTCGTCCAGACGAGAACTCAATCAAATGTGAAAGGGAC
GACACTTCGTCCATCAACAAAAATGATTTAGAAGCCGAGCTGTCACGCTTCGACACACTT
CGCAAGTCTTATAGTCAAGAAGATATGTCAGAATGGACGGATGCTGAACGTCGTATTGGG
GAGTTGACTTTATCTGAAGCTAGATCGGTCGGGGGAACTCTTCCAGCGAGCACTGGCAGA
GCTGCTTCATCCACCAGACTCACGCATCAGGAAGCCAACACCATGGCGGAACGAGACTTA
GGCTCCACTTTTCTCCTGCCGCACGTGCACCTCTATAAACCAGACCTTACCAGTGACGTG
TCCGAGTTCGACTCCCTGTGA
Protein sequence:
MKCVCRPGFARMFPDRPCKPTYTYSVRLGLGSRDNKVLKFHKSLSDNSTKEYESLSLATH
EGINRMIMQSDLRDVYHGVHITGFHPIEMRTKDGAYQGVINDFYVQLSDNAHESRLKEVI
EKYLRNNNYSLGGTEVYASEEFIESLNVSDFDECTSTQFNDCSEHARCFNLRGTYTCSCL
EGFADLSVNTLYPGRICSSDAIGCAGCNYHGTCFDRENAMICECFKWYAGRTCQVNLKAV
LITVTVVGALVIIVVTIWASKRCCSQKNPTNQTFVIGCMQGMPSLHQGNVPSKQRADRRA
LIAERNETAETCSVQNASLPYAPSKSRSRSHSKQAPEPPPHSPPPPPALMIPRARLHPLH
DSRDNLSRRKSSEVCNEAKLISYLESGATNTQEMRRKHSIESSYSVNKERANKQGALVSA
GYKVSTTIRPDENSIKCERDDTSSINKNDLEAELSRFDTLRKSYSQEDMSEWTDAERRIG
ELTLSEARSVGGTLPASTGRAASSTRLTHQEANTMAERDLGSTFLLPHVHLYKPDLTSDV
SEFDSL