| New model in OGS2.0 | DPOGS202722 |
|---|---|
| Genomic Position | scaffold1503:+ 802-2757 |
| See gene structure | |
| CDS Length | 822 |
| Paired RNAseq reads | 673 |
| Single RNAseq reads | 2076 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008433 (8e-132) |
| Best Drosophila hit | GDP-mannose 4,6-dehydratase (1e-106) |
| Best Human hit | GDP-mannose 4,6 dehydratase (2e-98) |
| Best NR hit (blastp) | GDP-mannose 4,6 dehydratase [Culex quinquefasciatus] (1e-126) |
| Best NR hit (blastx) | GDP-mannose 4,6 dehydratase [Culex quinquefasciatus] (3e-116) |
| GeneOntology terms | GO:0008446 GDP-mannose 4,6-dehydratase activity GO:0042351 'de novo' GDP-L-fucose biosynthetic process GO:0019673 GDP-mannose metabolic process GO:0005622 intracellular GO:0050662 coenzyme binding GO:0042350 GDP-L-fucose biosynthetic process |
| InterPro families | IPR006368 GDP-mannose 4,6-dehydratase IPR001509 NAD-dependent epimerase/dehydratase IPR016040 NAD(P)-binding domain |
| Orthology group | MCL13562 |
Nucleotide sequence:
ATAAGACCAAAGGAAATATATAACTTGGGGGCTCAATCCCACGTTAAGGTGTCGTTCGAG
TTGAGTGAATATACAGCTCAAGTAGACGCTCTGGGTACCCTTAGACTGCTGGAAGCGGTG
CGGACTGCTGGATTAGAGAAGGAAACTAGAATATACCAGGCTTCCACCTCGGAACTATAC
GGGAAAGTATTAGAAGTTCCCCAGAATGAGAAAACGCCGTTCTATCCAAGGTCGCCTTAT
GCGTGTGCTAAGCTCTACGGTCACTGGATAGTAGTGAACTATAGGGAGGCGTACGGGATG
TTCGCGTGTAACGGCTTACTCTTCAACCATGAGAGCCCGAGGCGGGGGGAGAACTTCGTA
ACGAGAAAAATAACCCGCGGAGTGGCCAAGATACAGCTGGGATTGATGTCGCATCTGGAA
ATGGGCAATTTGGATAGCAAAAGAGATTGGGGACATGCCAAGGATTATGTAGAGGCTATG
TGGCTGATACTGCAGCAGGATGAGCCGGAAGATTTCGTGGTTGCCTCCGGCGAGGCTCAC
AGTGTGAGGGAATTCATAGAGAAGGCTTTCGCGTGTGTGGGGAGAGGGGTGGTGTGGAGG
GGGGAGGGGGTGCACGAAACTGGTCACGATAAACATACGGACCAACTACTCGTTAAGGTC
AACCCAAAATATTTCAGACCCACGGAAGTGGATCTTCTTCTAGGTGACGCGTCAAAAGCC
AAACAGAAATTAGGTTGGACCAACAAAACCACCTTCGAAGAGCTGGTCAAAGATATGGTG
GAGGCCGACCTTGAACTCATGAAGAAAAACCCCGAGGCATAA
Protein sequence:
IRPKEIYNLGAQSHVKVSFELSEYTAQVDALGTLRLLEAVRTAGLEKETRIYQASTSELY
GKVLEVPQNEKTPFYPRSPYACAKLYGHWIVVNYREAYGMFACNGLLFNHESPRRGENFV
TRKITRGVAKIQLGLMSHLEMGNLDSKRDWGHAKDYVEAMWLILQQDEPEDFVVASGEAH
SVREFIEKAFACVGRGVVWRGEGVHETGHDKHTDQLLVKVNPKYFRPTEVDLLLGDASKA
KQKLGWTNKTTFEELVKDMVEADLELMKKNPEA