DPGLEAN00367 in OGS1.0

Genomic Positionscaffold5472:+ 235-7506
See gene structure
CDS Length1086
Paired RNAseq reads  865
Single RNAseq reads  3161
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA006308 (1e-30)
Best Drosophila hit  chaoptic (3e-72)
Best Human hitleucine-rich repeat-containing G-protein coupled receptor 4 precursor (2e-19)
Best NR hit (blastp)  cell surface protein chaoptin [Tribolium castaneum] (3e-85)
Best NR hit (blastx)  cell surface protein chaoptin [Tribolium castaneum] (2e-78)
GeneOntology terms



  
GO:0005886 plasma membrane
GO:0007156 homophilic cell adhesion
GO:0042051 compound eye photoreceptor development
GO:0005515 protein binding
GO:0042052 rhabdomere development
InterPro families
  
IPR001611 Leucine-rich repeat
IPR003591 Leucine-rich repeat, typical subtype
Orthology groupND

Nucleotide sequence:

TTACACGTAGACACTGGACATCCGCCATGCCTTTTCCAAGCTCTCTGTACGTGCTCTAAA
CCTGATGGTGATCTTGGTATCGTGACGTGCAACCACGTGCCCATCCTCAGGGTACCAGCC
GCCGTAAATAGCTCGAAAGTTTTCACGTTACAGTTGACTGGGAACAACATAAGAGATCTC
GAACCGCAGTTCTTCCAAGCCACAGGGTTATACAGGCTGGCTATAAACCAGAATCCGCTG
GAGAGTATACACGAGGAAGCTTTTTATGGCTTAGACAATACACTATGGGAGTTGGAATTA
ATGCAGGACAAGTTGACGGCTGTCCCGAGTCGAGCTCTGCGATATCTGCAAAAGCTGCGC
CTCCTTGATTTGACGGGTAACGAAATAACAGAAATTTCGGGTGACAATTGGCTCGGCTTG
GAGAACACGCTGCAAACCCTAATCTTAGCAAAAAATTCAATAGCCAGCTTGCCGTTAGAT
GCGTTCTCTGGATTGCCGATGCTGGAGACATTGGACTTACACGGGAACCATTTATCTGTA
ATTGATAGTGGAGTCTTCAGAGACGGTATGAGCAGACTCAGTAAGCTTCTTCTGGGAGAC
AACCAGCTAACGTTGATCCCTTATGAGGAGTTGTCTCCACTTCGGCAACTTCGAGTGCTT
GATCTTTCCAACAACCTTATCAAGCAAGTCCCTCCCGCCCATGAGTTAAATGGGGTTAAA
CTTTCATTGGATCAGCTTAACTTGGATCAAAATAGTATTCGAATTTTAATGCCTGGTTCG
TTTAAGTACTTCAACGTTCTGAACACCACTGTTCTTGATGGAAATCCCATATACTCCATC
AGGTTACATAGCTTGACATCATTGAAATTAGCCAATGGATTAGCAGATTCCGTAAAAATA
TTGCCATTTGAACCTTTGAAAGCACTTATAGAATTGCAGGATTTGGACGTTAGTAATAAC
AAATTGAGGAACGTCCCAGACACATCTTTCCACTTCTTATATAAGTTAAAAACATTAAAC
CTTCAAGATAATCTCATTGATCACTTCTCTAAAGGAACATTACAGGTAATTTTTTGTAAC
TTGTAA

Protein sequence:

LHVDTGHPPCLFQALCTCSKPDGDLGIVTCNHVPILRVPAAVNSSKVFTLQLTGNNIRDL
EPQFFQATGLYRLAINQNPLESIHEEAFYGLDNTLWELELMQDKLTAVPSRALRYLQKLR
LLDLTGNEITEISGDNWLGLENTLQTLILAKNSIASLPLDAFSGLPMLETLDLHGNHLSV
IDSGVFRDGMSRLSKLLLGDNQLTLIPYEELSPLRQLRVLDLSNNLIKQVPPAHELNGVK
LSLDQLNLDQNSIRILMPGSFKYFNVLNTTVLDGNPIYSIRLHSLTSLKLANGLADSVKI
LPFEPLKALIELQDLDVSNNKLRNVPDTSFHFLYKLKTLNLQDNLIDHFSKGTLQVIFCN
L