New model in OGS2.0 | DPOGS209636  |
---|---|
Genomic Position | scaffold154:- 281559-291549 |
See gene structure | |
CDS Length | 2589 |
Paired RNAseq reads   | 407 |
Single RNAseq reads   | 1267 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006701 (0.0) |
Best Drosophila hit   | hira (7e-126) |
Best Human hit | protein HIRA (4e-121) |
Best NR hit (blastp)   | PREDICTED: similar to ENSANGP00000010454 [Nasonia vitripennis] (9e-167) |
Best NR hit (blastx)   | PREDICTED: similar to HIRA protein homolog (dHIRA) [Apis mellifera] (3e-155) |
GeneOntology terms    | GO:0003714 transcription corepressor activity GO:0005634 nucleus GO:0003682 chromatin binding GO:0006338 chromatin remodeling GO:0035041 sperm chromatin decondensation GO:0001673 male germ cell nucleus GO:0035042 fertilization, exchange of chromosomal proteins GO:0006355 regulation of transcription, DNA-dependent |
InterPro families    | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR011046 WD40 repeat-like-containing domain IPR011047 Quinonprotein alcohol dehydrogenase-like IPR019781 WD40 repeat, subgroup IPR011494 TUP1-like enhancer of split IPR019015 HIRA B motif IPR001680 WD40 repeat IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain |
Orthology group | MCL13282 |
Nucleotide sequence:
ATGAAGCTTTTAAAACCCAGCTGGGTGAATCATGAAGACAAACCAATATTCTCGGTGGAT
ATTCATCCAACTGGGAAACGGTTTGCTACTGGAGGACAAGGCGGTGACTCCGGTAGAGTC
GTTGTTTGGAACTTGAACTCTGTTTTATATGAAGAGGTTGAAGTGGACCCAAATATTCCG
AAAATGCTCTGCCAAATGGACAACCATTTAGCTTGTGTAAATTGTGTGCGATGGAGTAAT
GATGGTCGCTATCTGGCATCTGGTGGTGATGATCGGCTGGTGATGGTGTGGGCGCTAAGT
GTGGCCACCTGTGCGGCCGGTAAACGTAAGACTGAGATGTGGAGGTGTATATCCACTTTA
AGGGGTCATGCAGGTGATATCCTGGATCTGGCGTGGTCACCGTCGGATAAATGGCTGGCA
AGTTGTAGTGTTGACAATTCCATAATAATTTGGAATGCGGAGAAGTTTCCGGAAATGGTT
TCTGTGCTCAATGGACATACAGGCCTTGTGAAAGGTGTCGCTTGGGATCCGGTGGGTAAA
TATTTAGCATCACAGTCGGATGACAAGTCATTAAGAATATGGAAAACAGCTGATTGGGCA
ACGGAAAAGACAATCACAGATCCCTTTGAAGAATGTGGAGAAAATACATATGACTCGGAA
AAGGTCACAATGGTGCTTCCCAGGTTTCGACCCCGCGCCCTCTCGTGTGAGAGGCGGGCC
TGGAACCTCCAGGCCGCCGCGACTTCCACATTACGCTTCAACAGTAACATCTTCGTGAAG
GAGGGGAAGAAGTGTTGTTGCGCCGCCGTGGGCTCCCGCGACCGGGCGCTGTCCATTTGG
CTGACCTCCCTCAAGAGGCCGCTGGTGGTCATACACGAGCTGTTCGGGAACGGCGTCCTC
GACCTCTCCTGGAGCTCCGACGGTCTCAATCTACTGGCGTGCAGCTCAGACGGGACCGTT
GCTTGCATAATGTTCACAAACAAGGAGATCGGAACACCGCTCACGGTCGACGAGAAGAAT
TCATTTTACGAGAAAATTTACGGCAAACGATTAATGAACGATTCGGGCGGCGACTTGTCC
TCAAACCTGTTGGTCGAGTGTCCAGAGATAATACTGGCCAGAGAGAAACAGGAGACGAAG
AAGGAACCGCCCAAAGACGAAACCACGCCCAAGACTTACAAGTTCCAGGCCGGGCCGGTG
TCGACGCCGCCCATGGACCGTCAGATAGAGACGCGGACCTCGGACGGCAAGCGGCGCATC
ACTCCCGTCTTCATCCCGCTCACGCCAGCCGACACCAACGAGTCCCTGGGCTCTCAGCCG
GCCACTGAGAACTGTTTCAGCACTTCCTCGCAGAACAAGTCGCGGATCCGAGTGGAGAGA
CGGGACGACATCGTCATACACCCCAACGTGAGCAACCACGCCACGACGCCCAAGACCGAC
CCGACTCATGCTGCGGACCCCGGTGTAGACAACCGTCTGCGCAAGCGCACGTCGTCGCCC
CTGCCGGGTCCCCGGCTGGAGTCGGTTCCGGACAAGCGCTGGTGTCCGTCCCCCGGGGAC
CGCCCTCCGGTAGGTCCGCCGCCGCCCGCCCTCGGAGCCGCCGGGCCCGTGGTGAGAGCC
GCGGGGGGCCTTCGGTTACAGGTTTTGAACAGAGCTTGCAGCACGTACTTCGGCACGTTG
TCTCGGCTGGAGCTCATACCCAACAACTCGGCCTCCAACGATCCTATATGGGACACATAC
TTGGGTTCTCCCGTGACCTGCATCGCGTGTGACGCTCGCTGGGCGTGCGTGTCGTGCGCC
GATGGCTCGCTGCACGCGTGGCGTCTATCCCGCACGCACGCAACACGCGCGTTGCCGCCT
ATCGCGCTGTCGTCGCAGGCGCGCCGCTTGTCGCTGGCGGGCGACATGCTGTCGGTGGTG
ACCATGTCCGCGCAGCTGGTCGTGTGGGACCTGGCGACGGCGTCGTGCCGCGTGCGCCCG
CTGTGCTTCAGGAACCTCCTCTCGTCGGATGACGTGACCGTCACGAACTGTTCGTTGCTG
GACGACAACCCCGTGCTGACCCTCAGCAACGGCAAGAGTTACATATACTGCATGAAGCTC
TGCGCCTGGGTGATCTGGTCGGACGTGTGTGACCCCGTCCGTCGCGCGGGCGGCGGGGTG
TGTCTGCGCGCGCCCCGCGTCCCTCACCACACGCAGCACCCTCCGCATCAAAGAACCATT
AGAACGCTCGTTAACCGGGTCAGCAGCAACCCTCGCAGTCGCTCGTGGCTGGAGGCTCAG
CTGGCGGCCTGCCTCCACCTGCGACTCGCGCCCGACTACAGACACTGGCTCACGGCGCTG
TTCGAGCATCTCCTGCAACACGGTACTGAGGAACAGATCCGACAGATACTGGACGAAATG
CTCGGCCCCAGCCACTGTACGTCGACGCCCAAGAAGTGGCAGAGTACTGTTCTGGGATTC
AAGAAGCACGATCTCCTGGAAGAGATGCTCTCGCTGCTGGTGAGGCAGCTCCGCTGGCAG
CGACTCTACACGGAGTATAACGATCAGCTCAAAGCCTTCAGAGAGACCACGCTCGTCAAC
GGGTTCTGA
Protein sequence:
MKLLKPSWVNHEDKPIFSVDIHPTGKRFATGGQGGDSGRVVVWNLNSVLYEEVEVDPNIP
KMLCQMDNHLACVNCVRWSNDGRYLASGGDDRLVMVWALSVATCAAGKRKTEMWRCISTL
RGHAGDILDLAWSPSDKWLASCSVDNSIIIWNAEKFPEMVSVLNGHTGLVKGVAWDPVGK
YLASQSDDKSLRIWKTADWATEKTITDPFEECGENTYDSEKVTMVLPRFRPRALSCERRA
WNLQAAATSTLRFNSNIFVKEGKKCCCAAVGSRDRALSIWLTSLKRPLVVIHELFGNGVL
DLSWSSDGLNLLACSSDGTVACIMFTNKEIGTPLTVDEKNSFYEKIYGKRLMNDSGGDLS
SNLLVECPEIILAREKQETKKEPPKDETTPKTYKFQAGPVSTPPMDRQIETRTSDGKRRI
TPVFIPLTPADTNESLGSQPATENCFSTSSQNKSRIRVERRDDIVIHPNVSNHATTPKTD
PTHAADPGVDNRLRKRTSSPLPGPRLESVPDKRWCPSPGDRPPVGPPPPALGAAGPVVRA
AGGLRLQVLNRACSTYFGTLSRLELIPNNSASNDPIWDTYLGSPVTCIACDARWACVSCA
DGSLHAWRLSRTHATRALPPIALSSQARRLSLAGDMLSVVTMSAQLVVWDLATASCRVRP
LCFRNLLSSDDVTVTNCSLLDDNPVLTLSNGKSYIYCMKLCAWVIWSDVCDPVRRAGGGV
CLRAPRVPHHTQHPPHQRTIRTLVNRVSSNPRSRSWLEAQLAACLHLRLAPDYRHWLTAL
FEHLLQHGTEEQIRQILDEMLGPSHCTSTPKKWQSTVLGFKKHDLLEEMLSLLVRQLRWQ
RLYTEYNDQLKAFRETTLVNGF