New model in OGS2.0 | DPOGS209642  |
---|---|
Genomic Position | scaffold154:- 100905-107809 |
See gene structure | |
CDS Length | 2364 |
Paired RNAseq reads   | 569 |
Single RNAseq reads   | 1369 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006705 (0.0) |
Best Drosophila hit   | CG5290 (9e-108) |
Best Human hit | tetratricopeptide repeat protein 27 isoform 2 (2e-89) |
Best NR hit (blastp)   | TTC27 protein [Culex quinquefasciatus] (7e-164) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL003070 [Aedes aegypti] (1e-160) |
GeneOntology terms   | GO:0005488 binding |
InterPro families    | IPR019734 Tetratricopeptide repeat IPR013026 Tetratricopeptide repeat-containing IPR011990 Tetratricopeptide-like helical |
Orthology group | MCL14783 |
Nucleotide sequence:
ATGGTGTCTGAAACAGAATTAATACCTTATCTATGTAATTACGATACCCAAACAAAACAT
TTAGAATCGGAAACAATAAAACAATTATGGTCGGGGACGTGGTCTATTGAGAACATTGGC
CTTTGTTTAAAATTGATAGATGGATTAAAGTCTGGCAGCTTAGACGAAACTATTACAAAT
TATATAAATGAGAATGGAACATCGGAATCAGTTTTACAAATAGCTATATCTTTATTTTTA
CAATTTTGTGTCAGGAATTGGAATTCACACCCAGAGAACTTAAATTTATCAGAATACTTA
GGTGTAAACTGGCCAGAAGCTTTGGATGTTAATGTGTTACTGCAGCAGGATTCCGAACCT
ATATATGTTAATATAGTGTATCCTGAATTATTGTATTTTTCTGGAAAAATATTTTCTACT
CTATGTTCTATTGAGCCAAGTTGGTTGCATCTCTGGTGGAATCTTCGATTCTTGAGTACA
CATCAGAGAGCTCTTGAAGACACGAGCGCCTCGCTGTATAATGAAAGTGAACTGATTATA
GCCAAACTCTGCAATGAATCCCAGAGGTTTGAAGATGGTTGTCTCAAAGTACTGCTGTAC
ATAGAGATTGCACAATTATATTTGCTGTACGCTAGAGTTCAAAAAGTTGAAGAGTATTTA
TTAAAGGCGCGGGAACTGGCTGGATTGAAACTTGAATTGACAGGTATCCTCGGCAAGAGG
ACGAAGTTCCAGCAGGAGCTAAAGGCGCAGTTAGTGTTGACGAGTGAGCTCGACAACAAG
ATTAGTCGTCCATCAGCGGAACAGAGTCACGGCGATTCTGAACTTCCGCCGGATATAGAG
CTCCAGGATGACGTGCGTCTGAACAAGATCCAGTACAATGAGAGCGTCACACAAGCTGAA
CTACCGAGCCTTGAACAAACTCTTTGTTTACTGACTGTTCAATACCTTCTTAAGTCCCAG
CCAAAGGATGAGTTGATGAAGGAGGAGCTCCAGCCTTACATAGAAGCGATCCTATCACAA
GCGAAGGGCCCCTGGTCCACACGAGTCGAAGCGCTCCTCATACGATGCAAACTCGAATCC
AATCACAAGAGAACCGTGGAGCGATCAATGTTACAGTGCGAGACCATAGTTAATGACAAG
TCTAGCGTCGCCCCTACTACCAGACTGTCCTACCTCTGGGCGGCTGGTCTCCAATTCGCC
TGGTGCTGGAGGCAGGAGCTGGGGAATTTGTATCTCAGTATGGGCATGGTGAAGGCAGCG
CTTGAAGAGTTCCAGCGGTTACAACTGTGGGAAGATGTCATAGTATGCTACACTATGCTA
CAATTGAGGCACAAGGCAGCAGAAGTAATACAACAACAGATAGATATTAAACCCACAGTG
AAATTATACTGTCTCCTCGGCGATGCCACAGACGATGAAGATTGCTACTCTAAAGCGTGG
GAATTCTCTGAACACAAGAGCAGTCGCGCTCAGAGACATTGGGGCAACTTCCTGTTTGAT
CACAAGAAGTATGAAGAATGCATTCCTCACTATGAGAAATCGGTTGAGATTAATTCCATA
CAGGAGAGTGTTTGGTTGAGATTGGGTTATGCGGCCTTGATGACGGAGAAATGGGAGTTA
TCAGCGAAGGCGTACAGGCGGTACACGTATTTGCAACCCAATACCTTCGAGGCCTGGAAT
AATCTGGCCAAAGTGTACGTTACGATGGGAGACAAACACAGAGCTTACAGAGCTTTGATG
GAGGCATTGAGATTCAATTATGACAACTGGAAGTTATGGGACAACGTTATTATGGTCAGT
ATGGACACCGGGCACTTCGATGACGTCCTGCGAGGTATTCACAGGATGCTGGACATACAA
CACAAGTATGAAGATGTGGAGGTACTGTCCTTGATGGTGAGGGCCATAGTACAGGATAAT
AAAGACGCTGATGGCAACAGTGCCGCCAGATTACGAAAACGCACCCTGGAACTGTTCGGA
AGAATAACATCCCTGCATCAAAATAAGCCGGAGCTGTGGCAGCTGTATGCGGACCTGAGT
CCTACTGTCCTGCTCAAGGCACAACGCTTGCAGAAAGCCTATAAAGGATTCACACTGAAT
GGTGATTGGCCTAATAGTGCAGACACATGCAAGAAGGTACTTATACTTCTGGAACAGCTA
CTTGAATGTAGCCTTAGAGCGAGACAGGAAGCAGAAGAGAAAGATTATTCCCAGGCCAAT
CAACAGCTGTCCTCAGCTCGGCTCACAGGTCAGGCTGGTGTACGTGCAGCGGAGAAACAA
GACTGGCCGGATACAAAGGAACAACTGGAAAAAGTTAGAACATTGTTGAATAATGTCACA
GACTATATGAAATCCATTATGTGA
Protein sequence:
MVSETELIPYLCNYDTQTKHLESETIKQLWSGTWSIENIGLCLKLIDGLKSGSLDETITN
YINENGTSESVLQIAISLFLQFCVRNWNSHPENLNLSEYLGVNWPEALDVNVLLQQDSEP
IYVNIVYPELLYFSGKIFSTLCSIEPSWLHLWWNLRFLSTHQRALEDTSASLYNESELII
AKLCNESQRFEDGCLKVLLYIEIAQLYLLYARVQKVEEYLLKARELAGLKLELTGILGKR
TKFQQELKAQLVLTSELDNKISRPSAEQSHGDSELPPDIELQDDVRLNKIQYNESVTQAE
LPSLEQTLCLLTVQYLLKSQPKDELMKEELQPYIEAILSQAKGPWSTRVEALLIRCKLES
NHKRTVERSMLQCETIVNDKSSVAPTTRLSYLWAAGLQFAWCWRQELGNLYLSMGMVKAA
LEEFQRLQLWEDVIVCYTMLQLRHKAAEVIQQQIDIKPTVKLYCLLGDATDDEDCYSKAW
EFSEHKSSRAQRHWGNFLFDHKKYEECIPHYEKSVEINSIQESVWLRLGYAALMTEKWEL
SAKAYRRYTYLQPNTFEAWNNLAKVYVTMGDKHRAYRALMEALRFNYDNWKLWDNVIMVS
MDTGHFDDVLRGIHRMLDIQHKYEDVEVLSLMVRAIVQDNKDADGNSAARLRKRTLELFG
RITSLHQNKPELWQLYADLSPTVLLKAQRLQKAYKGFTLNGDWPNSADTCKKVLILLEQL
LECSLRARQEAEEKDYSQANQQLSSARLTGQAGVRAAEKQDWPDTKEQLEKVRTLLNNVT
DYMKSIM