| New model in OGS2.0 | DPOGS209643 |
|---|---|
| Genomic Position | scaffold154:- 95895-99402 |
| See gene structure | |
| CDS Length | 936 |
| Paired RNAseq reads | 244 |
| Single RNAseq reads | 712 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006706 (6e-118) |
| Best Drosophila hit | Rabenosyn-5 (2e-60) |
| Best Human hit | rabenosyn-5 (4e-26) |
| Best NR hit (blastp) | FYVE finger-containing protein [Glossina morsitans morsitans] (6e-67) |
| Best NR hit (blastx) | GJ17284 [Drosophila virilis] (1e-63) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0035088 establishment or maintenance of apical/basal cell polarity GO:0005768 endosome GO:0008103 oocyte microtubule cytoskeleton polarization GO:0045451 pole plasm oskar mRNA localization GO:0006897 endocytosis GO:0034058 endosomal vesicle fusion |
| InterPro families | IPR017455 Zinc finger, FYVE-related IPR011011 Zinc finger, FYVE/PHD-type IPR000306 Zinc finger, FYVE-type IPR021565 FYVE-finger-containing Rab5 effector protein rabenosyn-5 IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | ND |
Nucleotide sequence:
ATGCCAAGTGATCCAAACCAAAGGAAACAGCATGAACAGGAAGTTGTTCCTTGGTTGGAT
GGGTCGTCTGTGAAGTTATGTCCAAACTGTGCTAAAGCTTTCAACCTGACGAGGCGGAAG
CATCATTGTAGACTCTGTGGTTCAATTCTATGCCATGACTGTTCAGTGTTCTTAGATTTA
AATGTTGCTAGTAAATATCCGTCTGCACCTCCTCAACCAGAAACATCAGCGGTCGAGAAG
TTTGGTCTCCGTCTCTGTGAACACTGCTACAACCTGATTCAACTCCGACGGCAGATTCAA
GAGAACAGGAATGTGAAGACTGTGTTAATGTCAGCCTACGAACAGATGAGGAGCTTGATG
GAACAAGCTACGCCAGCTGTTGAAATGTATGAGAAGATGTGTCAGAGTTTGTTTGACGGG
GAGACTATATACAGTCTGTCCGATGTGAACGCTATGCGCGGTCGTATAGGGAAGCTGGCT
GAGGGTATCGATCTGTTGAGCAAGCACATAGCGAGCCTGCCGGTACAGCCGGGGACGAGA
CAAGCCAAGCTCCAGAACTCTATCAGACAGGCCTCCGCACACTATATCAAGGAGGAGTTG
GTCTCGCTACGGAAATTGCCAACAGAGGCTCAAATAGAAGAAGTTAGGAGACACCGGTAC
GAGCGGGCCCAGAAGCAGATAGAGTTAGAAAGAGAACGGATAGAGAGGGAAAGAGAAAGG
AGAGAGAGGGAGTGGGGGGAGGAGGGGGAGACGAGCGGGGGCAGGGTCCAGCAGCACGAC
GATGATAACCCGATCCTAGAGCAGATGAACATTATAAGAGATTACATCAAAGAGGCCAGG
AGAGAACTGAGGTTTGAAGAAGTGGCAATACTAGAGCAGAACCTCAAGGATCTGAAGAAG
GAATATCAACTTCAGATGCTCTCAAACAAGTCCTAG
Protein sequence:
MPSDPNQRKQHEQEVVPWLDGSSVKLCPNCAKAFNLTRRKHHCRLCGSILCHDCSVFLDL
NVASKYPSAPPQPETSAVEKFGLRLCEHCYNLIQLRRQIQENRNVKTVLMSAYEQMRSLM
EQATPAVEMYEKMCQSLFDGETIYSLSDVNAMRGRIGKLAEGIDLLSKHIASLPVQPGTR
QAKLQNSIRQASAHYIKEELVSLRKLPTEAQIEEVRRHRYERAQKQIELERERIERERER
REREWGEEGETSGGRVQQHDDDNPILEQMNIIRDYIKEARRELRFEEVAILEQNLKDLKK
EYQLQMLSNKS