| New model in OGS2.0 | DPOGS209566 |
|---|---|
| Genomic Position | scaffold154:+ 24285-25156 |
| See gene structure | |
| CDS Length | 510 |
| Paired RNAseq reads | 160 |
| Single RNAseq reads | 875 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006627 (5e-29) |
| Best Drosophila hit | Tif-IA (4e-08) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to transcription initiation factor RRN3 [Tribolium castaneum] (2e-19) |
| Best NR hit (blastx) | PREDICTED: similar to transcription initiation factor RRN3 [Tribolium castaneum] (7e-20) |
| GeneOntology terms | GO:0005736 DNA-directed RNA polymerase I complex GO:0006356 regulation of transcription from RNA polymerase I promoter GO:0003701 RNA polymerase I transcription factor activity GO:0042254 ribosome biogenesis |
| InterPro families | IPR007991 RNA polymerase I specific transcription initiation factor RRN3 |
| Orthology group | ND |
Nucleotide sequence:
ATGCGAAAAACTTTAGACCGGCAGGCTGCTCTGGCGCGAGTGAAGTTCAGCTTTAAAAAG
AAGCAAGTAGAACAAATACTCCTAAGCTATGTAAGAGATGGAAATCCGGAGCAATTCAAT
GAGCTTGTAAAGGTCTTGAGGGATTGTCCTTTAAATGATAATAACTTTAGAATACTTTTC
GAAGATAGCTTATCTTGTGTAGTTTTACTTGGACGAGAGCTTAAGCCTTTCGTGGATGCT
CTTTGTTGTATAGAATGGGCTAGTAGGGAAGAAGAATTGGTTGAAATGTATAGCAGATTT
GTGCTCAGTCTTGTTACAGCACATACTTATCATTATTCAAGAATAATGGCTTCGCTCATT
AAGTTATTTAAACCTGATGGTGAAAATTGGCAGGACAGTCCATCTCCAGAGATGGTTTCC
CAGTGGTCGAATATTCACACAATCATTGCCCAGATAGTTGCAGTGATGCCTCTAACCAGT
GATCTCCTGATGCAAACCTATTATAGATAA
Protein sequence:
MRKTLDRQAALARVKFSFKKKQVEQILLSYVRDGNPEQFNELVKVLRDCPLNDNNFRILF
EDSLSCVVLLGRELKPFVDALCCIEWASREEELVEMYSRFVLSLVTAHTYHYSRIMASLI
KLFKPDGENWQDSPSPEMVSQWSNIHTIIAQIVAVMPLTSDLLMQTYYR