| New model in OGS2.0 | DPOGS209567 |
|---|---|
| Genomic Position | scaffold154:+ 25254-28033 |
| See gene structure | |
| CDS Length | 1029 |
| Paired RNAseq reads | 704 |
| Single RNAseq reads | 1924 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006627 (3e-128) |
| Best Drosophila hit | Tif-IA (7e-27) |
| Best Human hit | RNA polymerase I-specific transcription initiation factor RRN3 (4e-31) |
| Best NR hit (blastp) | transcription initiation factor RRN3 [Aedes aegypti] (2e-47) |
| Best NR hit (blastx) | transcription initiation factor RRN3 [Aedes aegypti] (6e-47) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0005730 nucleolus GO:0005634 nucleus GO:0005654 nucleoplasm |
| InterPro families | IPR007991 RNA polymerase I specific transcription initiation factor RRN3 |
| Orthology group | MCL12389 |
Nucleotide sequence:
ATGACCGTTATTGTGAGCAAAATGGTAGACCTGGATGCCAATGTTGTTGATCGGGATAAA
AACAAGCAAGAGACAATTTTTGATATGGAAATAGACGGCAAGGATGAAGTCAGTGAGACA
CTAGACTACTGTATGTTAGAAATACTGAAATGGCTTGAGGATGAACGGGATCCAGTGCTT
AACATATTCTGTAATGTTTTTGAGAGAGTTGTACTACCGACACATGGTATCAGACACGTC
CAATTCTTAATTCTGTACACCATATCGATAAGTCAGCAATGCGCGGATCGAATATTCACA
AACTTGTGGCTAGTTGCGGCCGGTTTGCACGGTCTAGGTCCTGGGGCATTGGCAACCAGG
AGAACTGCTGCCAGTCATTTGGCTGGTCTGCTCGCACGATGTGTAAGGGTGCCAAATTCC
AGACTTATCCAGTATCTGAGACTCATGGCTGATTGGTGTCATTCATATCTGACAGCGACA
CAGGAGTCAACGGTGGCCGACAACACCAAAGTGCACGGTGCCTTCCATGCCATATGCCAT
GCTATATTCTATCTAGTGGCATTTAAAAATCATCATCTATTTGTCAATAAAGAAAGCATA
AACTTTGTGGAATCCCTGAATCTGCCGCGTTTGGTGACATGCAACCTAAACCCCCTTCGG
ACCTGTCCACCACAGGTGACTCGAGCCTTCTCGTCTGTGACCCGTTCGCACCAAGTTGTT
TACTGTCAGGCCATCATAGAGAAGAATACGAGATCGACTCTTCAAAACGCGGTTCAGAAG
TATGATGAATGGTTTCCATACGATCCTTATACATTACCAATATCTGGTAAAATAATCTGG
CCGCTGTGTATGGAATACAAGGACATGTTCAAAGACAGCGACAATGAGACCCAGTACACG
AGTTTAAAACGTAAACTAGAAGCCGAAGACGATGATTACTTGATGCCCAGCGCATCTCAG
AGACTAGCTAGCTCCTTGTCGAACTGTATATCGCCCGGATTTAAAACCAGTGAAAGCATA
CTTATATAG
Protein sequence:
MTVIVSKMVDLDANVVDRDKNKQETIFDMEIDGKDEVSETLDYCMLEILKWLEDERDPVL
NIFCNVFERVVLPTHGIRHVQFLILYTISISQQCADRIFTNLWLVAAGLHGLGPGALATR
RTAASHLAGLLARCVRVPNSRLIQYLRLMADWCHSYLTATQESTVADNTKVHGAFHAICH
AIFYLVAFKNHHLFVNKESINFVESLNLPRLVTCNLNPLRTCPPQVTRAFSSVTRSHQVV
YCQAIIEKNTRSTLQNAVQKYDEWFPYDPYTLPISGKIIWPLCMEYKDMFKDSDNETQYT
SLKRKLEAEDDDYLMPSASQRLASSLSNCISPGFKTSESILI