| New model in OGS2.0 | DPOGS209572 |
|---|---|
| Genomic Position | scaffold154:+ 80511-81907 |
| See gene structure | |
| CDS Length | 978 |
| Paired RNAseq reads | 270 |
| Single RNAseq reads | 883 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006632 (4e-89) |
| Best Drosophila hit | thoc6 (2e-53) |
| Best Human hit | THO complex subunit 6 homolog isoform 1 (5e-44) |
| Best NR hit (blastp) | PREDICTED: similar to thoc6 CG5632-PA [Apis mellifera] (2e-89) |
| Best NR hit (blastx) | PREDICTED: similar to thoc6 CG5632-PA [Apis mellifera] (8e-91) |
| GeneOntology terms | GO:0005575 cellular_component GO:0051028 mRNA transport GO:0008380 RNA splicing GO:0006397 mRNA processing GO:0003723 RNA binding GO:0006810 transport |
| InterPro families | IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL12091 |
Nucleotide sequence:
ATGCTTGATAAGATATTTTATAACACGGTTTTATGCCAAACATATTCTCCGTGTGGTAAA
TATTTGGTAGCCGGTAATATTTATGGACAACTAGCAGTGTTTGATCTCGATAACATATTT
AATCCTGTGATAGAACTACTTACACCAGATTATAACAAGCCAAAACACATTCATACTTTA
GAGTCAGAGAATCAAGTATGTAGTTTAGTGAGCACAGAGAATTTTTTAATTGTTGGCTCA
GTAAATGAAATATTGGGATGGAACTGGAAATCAGTAATTCATCCAAAATTAGGTAAACCT
GCATGGACAATAAGAATACAGCCAAAGTCGTTCATTGAGAAATGTGATATTAATTATCTG
TGGTATTGTGAAGAAGAAGGAAAACTATATGTAGGATGTGGTGATAATAATATATATATA
TACAATTTAGAAGATGGTAAGCTTGTGTCTACCTTGGAAGGCCACTCTGATTATATACAC
TGTTTACATGGCAATGGACATCAACTTATTTCTGCTGGTGAAGATGGCAAGGTCCTTCTC
TGGGACACAAGAATGAAAAAAAGTCATAACAAAATCGAACCATACAATAACAGTAAAGTT
GCGAGACCAGATATTGGTAAATGGATGGGAGCCGCTGCTTTGGGAGATGATTGGATTGTA
TGTGGAGGTGGTCCCAGATTGGCTCTTTGGCATCTACGCTCCTTGGATGTTGTGACGGTG
TTTGATATTCCTGATCATGGAATTCATGTGTCCTTCTTTCATGATGACTGCGTGTTTGCC
GGCGGGGCTGCCAAGCACTTGTATCAGCTCAGTTACTCGGGAGATATAAGAGTTGAGCTG
CCAGTGTCATCAACCACAGTATACTCCGCGGTGCTGAGAACAAGCCCACATAAAGTCCTA
ACAATAGCTGGTTCCAGCCCCGAAATTGACTTGTGTACCACATTCAACTATAGAGACCAA
GTCTTGCATTTCAGATGA
Protein sequence:
MLDKIFYNTVLCQTYSPCGKYLVAGNIYGQLAVFDLDNIFNPVIELLTPDYNKPKHIHTL
ESENQVCSLVSTENFLIVGSVNEILGWNWKSVIHPKLGKPAWTIRIQPKSFIEKCDINYL
WYCEEEGKLYVGCGDNNIYIYNLEDGKLVSTLEGHSDYIHCLHGNGHQLISAGEDGKVLL
WDTRMKKSHNKIEPYNNSKVARPDIGKWMGAAALGDDWIVCGGGPRLALWHLRSLDVVTV
FDIPDHGIHVSFFHDDCVFAGGAAKHLYQLSYSGDIRVELPVSSTTVYSAVLRTSPHKVL
TIAGSSPEIDLCTTFNYRDQVLHFR