| New model in OGS2.0 | DPOGS209573 |
|---|---|
| Genomic Position | scaffold154:+ 93429-95612 |
| See gene structure | |
| CDS Length | 2184 |
| Paired RNAseq reads | 35 |
| Single RNAseq reads | 91 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006633 (0.0) |
| Best Drosophila hit | CG13930 (2e-64) |
| Best Human hit | WD repeat-containing protein 78 isoform 1 (1e-43) |
| Best NR hit (blastp) | PREDICTED: similar to axonemal dynein intermediate chain inner arm i1 [Tribolium castaneum] (3e-111) |
| Best NR hit (blastx) | PREDICTED: similar to axonemal dynein intermediate chain inner arm i1 [Tribolium castaneum] (5e-111) |
| GeneOntology terms | GO:0003774 motor activity GO:0005868 cytoplasmic dynein complex GO:0005875 microtubule associated complex GO:0042623 ATPase activity, coupled GO:0030286 dynein complex GO:0007018 microtubule-based movement |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL12312 |
Nucleotide sequence:
ATGTCTAGTGGGAATTCGGAGTATTCTCAGCCGAGCACTAATATAATTACAGATGAATCA
AGTGACTCTGAATCTACTGTAAAAACAAAAGCAGCTTATAGTTTTATGGAAAATAGAGAA
AAGTACAAAGTGATAGTTGACGGTGTAGACTGTACACCAGACAATATTGTCGATAATGAT
TTTGTTACGATGCAAGATACTTTTACACATGCTGCTCTTGACAGTAGACCAAGAGCGCGG
AGCGAGGTAGCGTTGAAGGAAGCCAAAAGTAGGACTAAATCTGCCTTAGATACGGGGATG
AAAGTGTATGCTACTACAATCTCCCTTGACGACATTTATATCGACCACACACTGAATACT
GAAGAAGGTTTTACGTCCGACGAACTAGATTTGGATATCGCTCCCTCCGCTTTTTATTTG
CCGAAAATGAATCCTATAACCTCGTATCCACCTGAAATAACTATAACTTTAAAAGAGACA
GAAACATATTTTCTGTTTGAATTACCAACAACTTCATATGAGAAAGGGACTTCAGAGGCC
ACATTGGTAGAAGAAGAAAATGAATTCTATCAATACATAACAGTAGGAAAAGGAAAAAAC
AGAAAGATGGTGACAGAAGAAACTCAATCTAAGGAATGTGTCTCGCAAACTAGACATACA
CTAGCTACAAGGCCACAAAAGAAAAATGCGATCAGTTTTGCTTCCATGTGGGATATGCAT
GACACTTACGCACGTCTTGCTCGAGTAAAGGCTGAAGAAAAACCTGACGAGATGGTGATG
TATCAATCCGCCGCGCCTACTTTATTGCGAAAGAAAATAGACAAATATGACCCCAGCGAC
GAGCGACGCGGGAAAAATTTTGACGAAATTTATAACACCCCGCAGTTTTTGGATGCGATT
CTTTTAACGGAGAGGGTTCTTTCAACCTTGAACTATGATAAAGAACAAAAGACATTCCGA
GGTCTCGTGAAGATAGACCCGCTCTCGTTGGATTTAATTTATATATATAGTATGAAGCCT
CTGTGGACCCTCGAATGTCCCGAAGCGGAAAATAGACCCATAACAAGCATTACATTCAAT
CCTAAAAATAACGATATTTTAGCCGTAGGACATGGAAAGTTTACTTATGCGGAAAAATTT
ACTGGATTAATATGCGTCTGGTGTACTAAGAATCCATGTAAGCCAGAGAGATTATATAAC
TTTCATGACCCTTTGACATCGGTAGCATTTGCAGACATAAATCCAAATTGGTTAGCATGT
GGATTTTCTAACGGGGACGTCTTAATTTTAGATGTTATTTCTTATCCCATAAAAATAATT
GCTAAAAGCAAACGTGATACAAATCCTTGTTTCGAACCGATCTGGACCACAAGTTGGCGG
ACCAGTGACAACGAGAATCAGTTCGTTATGACTACATGTCAAGACGGTAGGATCAATAGA
TTCACGAGCACAAAAACACACGACTTCATTTGCTCACCGATGATGCGCATATCAACCGTT
GAGGGTAAAATGAAAGGCATCGAAGCGCCGAGACAGTGTCAAAAGGAAGACGTGCCGATA
ACGAGACATCCGGCAGCTTTGTGTATGAAATGGCATCCAAATGTAGACCATATTTACTTC
GTCGGCACAGACGAGGGTTGCATCCACAAATGCTCGACGCACTACTTGAACCAGCATATG
GATGTATTCAGAGCCCACTCTGGCCCTGTATACGGCATGGAATTTTCTCCATTCATGGAT
ACTTTGCTGGTTACGTGTGGAGCGGACAGTGCGGTCAGGCTTTGGATGGAAGGGATAGAT
GACGTCATACTTACGATGAACTGCCCGACAGCAGTTTACGACGTAGCATTTTGCCCAGTC
AATTCTACTGTGATAATATGTGTTAGTGGCAACGTACTATCTATTTGGGACCTCCGCAGA
AAGAACCATATGCCTTGCGCCGAGTATACATTCCCAGGTCAAGTCGTTCTGACATACATA
AAGTTCTCACCGTCAGGAGATAACGTGTTTGTCGGCGACACGTTAGGCCGCGTTCACACA
TTCCATTTGGAGGACACGCCTATAGCTCCATTTTATCAAAAGAAGCTATTGGATGAGACA
ATAAAGAAGGCCCTGTGTACACGTCCCCTCATATTAAAGCAGTTGGAGAAGTTAGAAAAA
TTCAGGGAGAAATTTGGAAAATAG
Protein sequence:
MSSGNSEYSQPSTNIITDESSDSESTVKTKAAYSFMENREKYKVIVDGVDCTPDNIVDND
FVTMQDTFTHAALDSRPRARSEVALKEAKSRTKSALDTGMKVYATTISLDDIYIDHTLNT
EEGFTSDELDLDIAPSAFYLPKMNPITSYPPEITITLKETETYFLFELPTTSYEKGTSEA
TLVEEENEFYQYITVGKGKNRKMVTEETQSKECVSQTRHTLATRPQKKNAISFASMWDMH
DTYARLARVKAEEKPDEMVMYQSAAPTLLRKKIDKYDPSDERRGKNFDEIYNTPQFLDAI
LLTERVLSTLNYDKEQKTFRGLVKIDPLSLDLIYIYSMKPLWTLECPEAENRPITSITFN
PKNNDILAVGHGKFTYAEKFTGLICVWCTKNPCKPERLYNFHDPLTSVAFADINPNWLAC
GFSNGDVLILDVISYPIKIIAKSKRDTNPCFEPIWTTSWRTSDNENQFVMTTCQDGRINR
FTSTKTHDFICSPMMRISTVEGKMKGIEAPRQCQKEDVPITRHPAALCMKWHPNVDHIYF
VGTDEGCIHKCSTHYLNQHMDVFRAHSGPVYGMEFSPFMDTLLVTCGADSAVRLWMEGID
DVILTMNCPTAVYDVAFCPVNSTVIICVSGNVLSIWDLRRKNHMPCAEYTFPGQVVLTYI
KFSPSGDNVFVGDTLGRVHTFHLEDTPIAPFYQKKLLDETIKKALCTRPLILKQLEKLEK
FREKFGK