New model in OGS2.0 | DPOGS209577  |
---|---|
Genomic Position | scaffold154:+ 183987-184485 |
See gene structure | |
CDS Length | 324 |
Paired RNAseq reads   | 33 |
Single RNAseq reads   | 227 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006638 (6e-18) |
Best Drosophila hit   | receptor component protein, isoform B (9e-13) |
Best Human hit | DNA-directed RNA polymerase III subunit RPC9 isoform a (1e-12) |
Best NR hit (blastp)   | calcitonin gene-related peptide-receptor component protein [Bombyx mori] (2e-42) |
Best NR hit (blastx)   | calcitonin gene-related peptide-receptor component protein [Bombyx mori] (4e-41) |
GeneOntology terms    | GO:0000166 nucleotide binding GO:0001635 calcitonin gene-related polypeptide receptor activity GO:0001669 acrosomal vesicle GO:0003824 catalytic activity GO:0003899 DNA-directed RNA polymerase activity GO:0005634 nucleus GO:0005886 plasma membrane GO:0006350 transcription GO:0006383 transcription from RNA polymerase III promoter GO:0006950 response to stress GO:0006954 inflammatory response GO:0007165 signal transduction GO:0007218 neuropeptide signaling pathway GO:0009360 DNA polymerase III complex GO:0009615 response to virus GO:0044237 cellular metabolic process GO:0045087 innate immune response |
InterPro families    | IPR010997 HRDC-like IPR006590 RNA polymerase II, Rpb4, core IPR005574 RNA polymerase II, Rpb4 |
Orthology group | MCL15751 |
Nucleotide sequence:
ATGCAGATATTGCAGAAACTGAAAGACAATACTCAGAGAAAACATAAGCGAGAAGCTTCC
TTGGCCACAGTCACATATGAGACTGTACATTACCTGCAAAATACAGAATGCAAAAATCAA
AGTGAAGAATGTATACAACAGTTTTTGGAAGCAATGAAAAGCTTTAAATTGACAAAGTCT
GAAAAACTGATGATGGTTAATACACCTCCGAGAACTGAGCTGGAGATACAATTGATAGTA
CAGGAGAGTGAAGAGAGGCTATCTGAAGATGATGTCGCTAAAATTATATCAATAGTTAAC
AAAATTTTGCCCGTTAATTCATAA
Protein sequence:
MQILQKLKDNTQRKHKREASLATVTYETVHYLQNTECKNQSEECIQQFLEAMKSFKLTKS
EKLMMVNTPPRTELEIQLIVQESEERLSEDDVAKIISIVNKILPVNS