DPGLEAN00406 in OGS1.0

New model in OGS2.0DPOGS209577 
Genomic Positionscaffold154:+ 183987-184485
See gene structure
CDS Length324
Paired RNAseq reads  33
Single RNAseq reads  227
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA006638 (6e-18)
Best Drosophila hit  receptor component protein, isoform B (9e-13)
Best Human hitDNA-directed RNA polymerase III subunit RPC9 isoform a (1e-12)
Best NR hit (blastp)  calcitonin gene-related peptide-receptor component protein [Bombyx mori] (2e-42)
Best NR hit (blastx)  calcitonin gene-related peptide-receptor component protein [Bombyx mori] (4e-41)
GeneOntology terms















  
GO:0000166 nucleotide binding
GO:0001635 calcitonin gene-related polypeptide receptor activity
GO:0001669 acrosomal vesicle
GO:0003824 catalytic activity
GO:0003899 DNA-directed RNA polymerase activity
GO:0005634 nucleus
GO:0005886 plasma membrane
GO:0006350 transcription
GO:0006383 transcription from RNA polymerase III promoter
GO:0006950 response to stress
GO:0006954 inflammatory response
GO:0007165 signal transduction
GO:0007218 neuropeptide signaling pathway
GO:0009360 DNA polymerase III complex
GO:0009615 response to virus
GO:0044237 cellular metabolic process
GO:0045087 innate immune response
InterPro families

  
IPR010997 HRDC-like
IPR006590 RNA polymerase II, Rpb4, core
IPR005574 RNA polymerase II, Rpb4
Orthology groupMCL15751

Nucleotide sequence:

ATGCAGATATTGCAGAAACTGAAAGACAATACTCAGAGAAAACATAAGCGAGAAGCTTCC
TTGGCCACAGTCACATATGAGACTGTACATTACCTGCAAAATACAGAATGCAAAAATCAA
AGTGAAGAATGTATACAACAGTTTTTGGAAGCAATGAAAAGCTTTAAATTGACAAAGTCT
GAAAAACTGATGATGGTTAATACACCTCCGAGAACTGAGCTGGAGATACAATTGATAGTA
CAGGAGAGTGAAGAGAGGCTATCTGAAGATGATGTCGCTAAAATTATATCAATAGTTAAC
AAAATTTTGCCCGTTAATTCATAA

Protein sequence:

MQILQKLKDNTQRKHKREASLATVTYETVHYLQNTECKNQSEECIQQFLEAMKSFKLTKS
EKLMMVNTPPRTELEIQLIVQESEERLSEDDVAKIISIVNKILPVNS