Genomic Position | scaffold11267:+ 82-3824 |
---|---|
See gene structure | |
CDS Length | 1263 |
Paired RNAseq reads   | 195 |
Single RNAseq reads   | 837 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001769 (3e-39) |
Best Drosophila hit   | Ran GTPase activating protein (3e-14) |
Best Human hit | ran GTPase-activating protein 1 (4e-12) |
Best NR hit (blastp)   | ran gtpase-activating protein [Aedes aegypti] (2e-17) |
Best NR hit (blastx)   | ran gtpase-activating protein [Aedes aegypti] (2e-16) |
GeneOntology terms    | GO:0005098 Ran GTPase activator activity GO:0005737 cytoplasm GO:0045132 meiotic chromosome segregation GO:0006913 nucleocytoplasmic transport GO:0005515 protein binding |
InterPro families   | IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype |
Orthology group | ND |
Nucleotide sequence:
ATGAGAAAAATAACTACGTCTATTATTCCCTTCACTACATTACACTTAAAAAATTACGAA
GCACTCGATAAAATATTATACCTTACCTATATAAACAATTTATTTAACGGCTTATCAAAA
AGGAAATCATATATATATATATATCCAGAACATATAAAACTATATCCTCTAAACCCACCA
GCACAGCCAATCATAGAAGCGATCAACGCCTGCCCAAACCTCCATTACCTGACCCTAACC
GGTAATACACTGGGTGTTGAAGCCGCTAAAGCTATTGCAAAAGCATTATCGAGACACCCG
GAATTGAAAGTCGCTCGCTTCAGTGACATGTTCACGGGGAGGATGAAGACGGAAATTCCT
CCGGCACTGTCAGCGCCATCTATTGTCTGTCTCACGTTACTTCATACAGATACCAAACTC
ACTACAGGAAAAACTGTGAACGTTGCATATGAAGACATAGCCCATTTTTTTATATATGTG
TTTGTAATCCACAGTGTATCAGAATTATATGACTCGGAACCGGTTGTGACACCTGAAGAT
GAGGCAGCCCTGCTACACTATGTCTGCGCTGAACCACCACCACCGGAGCCCTTCAAGCCT
GTTGAGGAGTGGCTGTTGGGGGTCTACCATTCCTGGTGTGAGATCAGCGCTCTCATGTAC
ACCCTCGTTGGGACCAACATGAGTTCAGAGATGTCGAGGTCGCCCTGGTCGTACGTCGCT
CGTTTCGGATGTCACTGCCGCCTGTGTCTGTCACTAGCCAATAACGAAACGGCCCTTCAG
ACCTGGATGCACGGACTGGTAGCCGAGTTAGCTGGAGGTAGCACAGCACCGCTGGGAGCC
AACATTGTCCGAGCCCTGGGGCTTTCACCCGGAGAGCATCTACCACCTTCCACCTGGGAT
ATTGCTAGACTACAGAGGACTGCTGTCTGCGATGACAGTCTATCGATAATCCAGAATCAC
CTGGAAAGATTGTCCCAGGAGAATGACGTGACCAGCCAGATTGTGAACAACATTTGTCTA
TGCAGAACATACGACCGGCCCTTCGAGAAGCAATATGCCATGGAAAGATTCTGTAAGCTC
CTAGAAAACTTCAAGACTGCATCTAGTATAACATTTAAGTCCATTGAGTTAAGCCACAAT
GAGATTGGTCGGGAAGCTTGCATGCAACTGGTTGAGGCTCTGACAATACAACCGGGGGCC
AAGGATAGGCTGACAAGAGTTAATCTAGCCGGTGAGTTGACGGAGAGAATATTAAGTAAA
TAA
Protein sequence:
MRKITTSIIPFTTLHLKNYEALDKILYLTYINNLFNGLSKRKSYIYIYPEHIKLYPLNPP
AQPIIEAINACPNLHYLTLTGNTLGVEAAKAIAKALSRHPELKVARFSDMFTGRMKTEIP
PALSAPSIVCLTLLHTDTKLTTGKTVNVAYEDIAHFFIYVFVIHSVSELYDSEPVVTPED
EAALLHYVCAEPPPPEPFKPVEEWLLGVYHSWCEISALMYTLVGTNMSSEMSRSPWSYVA
RFGCHCRLCLSLANNETALQTWMHGLVAELAGGSTAPLGANIVRALGLSPGEHLPPSTWD
IARLQRTAVCDDSLSIIQNHLERLSQENDVTSQIVNNICLCRTYDRPFEKQYAMERFCKL
LENFKTASSITFKSIELSHNEIGREACMQLVEALTIQPGAKDRLTRVNLAGELTERILSK