| New model in OGS2.0 | DPOGS205300 |
|---|---|
| Genomic Position | scaffold766:+ 12037-14130 |
| See gene structure | |
| CDS Length | 1839 |
| Paired RNAseq reads | 86 |
| Single RNAseq reads | 210 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011042 (6e-31) |
| Best Drosophila hit | mus81 (2e-37) |
| Best Human hit | crossover junction endonuclease MUS81 (3e-43) |
| Best NR hit (blastp) | Mus81 protein [Danio rerio] (4e-60) |
| Best NR hit (blastx) | Mus81 protein [Danio rerio] (3e-63) |
| GeneOntology terms | GO:0003677 DNA binding GO:0005515 protein binding GO:0003824 catalytic activity GO:0006259 DNA metabolic process GO:0004518 nuclease activity GO:0006281 DNA repair GO:0016787 hydrolase activity GO:0004519 endonuclease activity GO:0006310 DNA recombination GO:0046872 metal ion binding GO:0005634 nucleus GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR011335 Restriction endonuclease, type II-like IPR010996 DNA-directed DNA polymerase, family X, beta-like, N-terminal IPR020819 DNA repair nuclease, XPF-type/Helicase IPR006166 ERCC4 domain |
| Orthology group | MCL13480 |
Nucleotide sequence:
ATGGCTGTTAATAGTAAAAGAATAACTTTAAAACGAACCAGACCAAATCCATTATTTCAA
CGATGGCTTCAGGAGCTACAGGATGAGGCAAAGCTTGAATTGAACAATTTAGAATATTCA
TTGGATGAAGCTATCAGTTCATTATCCAAGTACCCTTTACCGTTAGAAAGTGGCGCGGAG
TGCGCTATACTAAAAGGTTTCGATAATAAACTATGCTCTTTCCTCGATAAGCGTCTACAA
GCTTACACAAGCTCAAATAGATTGGATAATAATTCTTCCAAAGTTACTAGCACAACCCTA
CCTGAACTAGAGCCAATAGATATCAGTTCTAAAAAAGCCAAAAACAATTCCATTACCAAA
GATGACTTTGAGCAACAATCTGCAAGAAACATTTTAAAGTGCACCAAGCTTACTACTGAT
GTGCCTTGTGGAACAGATGACTTATCTGACAATGAAGTACAAGAAGTTCAAGAGGTACCA
TCCCAAAGTAATGTGCTAAAAGGATCTCGAAAAGATTACTGTTCTAATTTAATTCAAGCT
AACTACAGCTCTCTGAGTCCTGAATTAGAAAAATCACTTAGAGGAAGGGAAAGGAAATTA
AAATACAAACCTATCTACAAGTCTGGTAGTTATGCTATAGTGATGGGTCTCTGGGAACAT
TCAATAGTGAATTCAAAGCAGGGTATTAGTAAGATGGATTTGCTAGAACTAGCCCATAAA
TACATTGAGAGTTCTATGAAAAACGCTTCAGATGCTTTACATAATTTGTTATGGGCAAAT
ATGAATAACCTTGTATCAAAGGGCCTTGTAACGAGAAAGAATGGAGAAACTCCAGTATTT
AAATTGACAAAATTGGGTATTAAAACTGCAAAGGTACTGTATAAAGAATACAAAATTAGA
GAAAAACCTAAAGTTACAAATTCGAAACAACCCGAAGAAGAAGATTGTGACGGATCTAAA
AATAATGTTCCAATTAATTCCAGAAACCGCATTGACACTTGTAATACAGAGGTTGAAGAA
GTAGTGGAATTTGAAGCTGGTTCATATGATATTATTTTATTTGTAGATGTTAAAGAAACT
TCTGGCTTAGCTAAGAAGAATGATCCTCTGATGCTCCAAATGAAGAAATATCCTAATCTT
CAACACGAGTTTAGATCTTTGAGTGTCGGTGATTTTGCATGGATAGCAAGGCACAGGTTA
AGTAAAGAAGAATTAGTGCTGCCTTATATAGTTGAGAGGAAAAGAATGGACGATTTCGCT
AATAGTATAAAAGATGGTAGATATCATGAACAGAAATTCAGATTGAAGAAAAGTAAAGCA
AAAGTTGTTTACTTGGTTGAAAATTATGATAGTAAATATGTTGGTTTGCCCTATCAGACG
TTAATGCAAGGATTGGTCAATACGAGAATTAGGGATGAGATTCAGGTACATCGAACAGAT
TCATTGGCGGCTACTGTTAGATTCTTAGCCATTCTGACAATGAAAATAATTAACGAATAT
CAGAATTGTTCTGTTAAGGGTCACCACAAAATGGCGGAAGGCGACATGTTGATGACATTC
AATTATTTTAAAAAAGCTCTCGTAAAAAATAAACCTTTGTCTTTGAAATGTACCTTTATA
AAAATGCTTTTACAACTACGAGGATTAACAGCAGATAAAGCTGTGGCTATAACTAATGAA
TACGGTACGCCAAAATTATTAATGGATGCATATGAAAATTGTGATAAAAAAAAAGGTGAA
CTGTTGTTAGCTAATATTAAAGGCAAGAGTAAACGTAATGTAGGACCTCGTGTAAGTAAA
AAACTGTACAAATTGTTTACATTGAGAGAATTAACGTAA
Protein sequence:
MAVNSKRITLKRTRPNPLFQRWLQELQDEAKLELNNLEYSLDEAISSLSKYPLPLESGAE
CAILKGFDNKLCSFLDKRLQAYTSSNRLDNNSSKVTSTTLPELEPIDISSKKAKNNSITK
DDFEQQSARNILKCTKLTTDVPCGTDDLSDNEVQEVQEVPSQSNVLKGSRKDYCSNLIQA
NYSSLSPELEKSLRGRERKLKYKPIYKSGSYAIVMGLWEHSIVNSKQGISKMDLLELAHK
YIESSMKNASDALHNLLWANMNNLVSKGLVTRKNGETPVFKLTKLGIKTAKVLYKEYKIR
EKPKVTNSKQPEEEDCDGSKNNVPINSRNRIDTCNTEVEEVVEFEAGSYDIILFVDVKET
SGLAKKNDPLMLQMKKYPNLQHEFRSLSVGDFAWIARHRLSKEELVLPYIVERKRMDDFA
NSIKDGRYHEQKFRLKKSKAKVVYLVENYDSKYVGLPYQTLMQGLVNTRIRDEIQVHRTD
SLAATVRFLAILTMKIINEYQNCSVKGHHKMAEGDMLMTFNYFKKALVKNKPLSLKCTFI
KMLLQLRGLTADKAVAITNEYGTPKLLMDAYENCDKKKGELLLANIKGKSKRNVGPRVSK
KLYKLFTLRELT