| New model in OGS2.0 | DPOGS214016 |
|---|---|
| Genomic Position | scaffold624:+ 44848-48052 |
| See gene structure | |
| CDS Length | 1131 |
| Paired RNAseq reads | 416 |
| Single RNAseq reads | 1184 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004056 (9e-67) |
| Best Drosophila hit | ND |
| Best Human hit | pentatricopeptide repeat-containing protein 2 (5e-20) |
| Best NR hit (blastp) | PREDICTED: similar to pentatricopeptide repeat domain 2 [Tribolium castaneum] (1e-79) |
| Best NR hit (blastx) | PREDICTED: similar to pentatricopeptide repeat domain 2 [Tribolium castaneum] (1e-76) |
| GeneOntology terms | GO:0001822 kidney development GO:0001889 liver development GO:0005739 mitochondrion GO:0007005 mitochondrion organization GO:0007507 heart development GO:0010468 regulation of gene expression GO:0048747 muscle fiber development GO:0050684 regulation of mRNA processing GO:0055010 ventricular cardiac muscle tissue morphogenesis |
| InterPro families | ND |
| Orthology group | MCL15064 |
Nucleotide sequence:
ATGTCCTTATATAACTACTTATCAAAAATATTTTTAAGCAATAGCTCACGATATACTTTT
GGAATCAGGAGTTTTCATACAACACACGTGCAACAACTGTACGCTCCATCAGCACTAGGA
ATCGATGGTTACTTACAAACTAGGAAAAGAATAAAAGACCAATTTTCTAACTTTTCCGAT
AAATTTAGAACCAAAATGTTAGATTTTGTAAGTGATTCGAAAAACATGATTTTTACTGAA
GATTTAAAGAACATGGTGCATTTAGCGGAGCCGACAGATTTGGAGCTAGTTACTAATATG
ATTAAAAAGTTTAACACACAGAAAACAGAATTCAGATTTGTATCTTTCATATTTGGTCCA
GTAGTCATGAGAATGTTTCACTTTTTAGATGCACCCAATGAAGCATTAAAGTGCTTCGAG
GACACGGACAATAATGGTTTTTTTGATCAATTGGTGTCCTATCAGATACTACTTGACCTG
CTCTATAATAATGAAATGTTTGATGAAATGTACAGGGTGTTTGAAAAGGTTCAAGAGAAA
CAAGTGAACATGACAAAGTTTCCTAAATATCCGGTAGTTTTAATATTGGCAGCATGTTAC
AAACAGAATACACCAAAGAGTTTCGAATATGCAACAAAGTTATGGTCGGATATGATTAAT
GTTGGTATTGTACCATTGAGGAGGGCATCTACTTTTTTTGGCGCTTTGGCATTAAGGCAA
GGTGCTCCACATATAGCTTTGGAGTCAATGTCACAACAGAAACCACATTACATCACTATT
AGAAATATAAAGGCAGTTTCATTATCAGAGCTACACAGATTTGATGAAGCTATGACAGTA
TTAAGAGGTGTTCTAGATGTTGATCAACCAGAACAAAAGGACAAACATACATTCTTCAAA
GAAACTATTACTAAAGTTCGTACAGCCATAGAGGACTCAAACAATAAAGACACCCTGAAG
CGATTTGACGATATTGAAAAGGCTTTGAAGGACCGTAATCTTATAGATGATCAGACATTA
GATCAGTTGATAACATCCGAGATCACTCTTAAGCCAAGAGTCAAAAACCTACCTCGTGGC
ATGCCCAAGATGGCATTCAAGATGAGACAAAAGAATGATTTATTAGGGTAA
Protein sequence:
MSLYNYLSKIFLSNSSRYTFGIRSFHTTHVQQLYAPSALGIDGYLQTRKRIKDQFSNFSD
KFRTKMLDFVSDSKNMIFTEDLKNMVHLAEPTDLELVTNMIKKFNTQKTEFRFVSFIFGP
VVMRMFHFLDAPNEALKCFEDTDNNGFFDQLVSYQILLDLLYNNEMFDEMYRVFEKVQEK
QVNMTKFPKYPVVLILAACYKQNTPKSFEYATKLWSDMINVGIVPLRRASTFFGALALRQ
GAPHIALESMSQQKPHYITIRNIKAVSLSELHRFDEAMTVLRGVLDVDQPEQKDKHTFFK
ETITKVRTAIEDSNNKDTLKRFDDIEKALKDRNLIDDQTLDQLITSEITLKPRVKNLPRG
MPKMAFKMRQKNDLLG