New model in OGS2.0 | DPOGS202424  |
---|---|
Genomic Position | scaffold4935:- 3176-7213 |
See gene structure | |
CDS Length | 546 |
Paired RNAseq reads   | 225 |
Single RNAseq reads   | 1002 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013289 (1e-56) |
Best Drosophila hit   | kin of irre, isoform A (5e-38) |
Best Human hit | kin of IRRE-like protein 3 isoform 1 (8e-17) |
Best NR hit (blastp)   | irregular chiasm C-roughest protein [Culex quinquefasciatus] (4e-48) |
Best NR hit (blastx)   | irregular chiasm C-roughest protein [Culex quinquefasciatus] (3e-42) |
GeneOntology terms    | GO:0005886 plasma membrane GO:0007520 myoblast fusion GO:0016202 regulation of striated muscle tissue development GO:0005515 protein binding GO:0007523 larval visceral muscle development GO:0007157 heterophilic cell-cell adhesion GO:0007156 homophilic cell adhesion GO:0009986 cell surface GO:0005912 adherens junction GO:0007514 garland cell differentiation |
InterPro families    | IPR013783 Immunoglobulin-like fold IPR007110 Immunoglobulin-like IPR013162 CD80-like, immunoglobulin C2-set |
Orthology group | MCL10470 |
Nucleotide sequence:
ATGTTCCACGATTCCAGTGAACCGCCGATACGTTCAAGATACGCTCATTTGACAGTACTG
ATAGCTCCTCAACCGCCCAAAATACTACAGGGTGCGTTTATAGATGCCACTGAGGGCGAA
CCAGTTGACATTGAATGTGTGTCTGAAGGGGGAAAGCCGGCTGCTGAAATAACTTGGGTC
GACGGTAATCAAGTGGTGATTAAAGACAATGTCAGGAGCAGAATCGATGAATTACCAGAC
GGACAAAGATACAAAACGAGCTCGGTGCTGCGGTTAATACCAAGTTCGTCCCACCATGAG
CAGCATATCACATGTCAAGCCCAGAATACAGCAGATCGGGCTTACAGGATGGCTACAGTA
TTGATAGAGGTAAAGTACGCTCCCAAGATCAACATCACGATGTCTACGGGTGTCGTGTCT
GAAGGTGGTGAGGTACGGGTTCGGTGTTCCGTAGACGCTAACCCGCCACCCCAAATATAT
AGATGGTACTTAAACAACAAGCTCCTTGTTGGAGATTACAATGAGGAATTGGTAAGTCAT
ACTTAA
Protein sequence:
MFHDSSEPPIRSRYAHLTVLIAPQPPKILQGAFIDATEGEPVDIECVSEGGKPAAEITWV
DGNQVVIKDNVRSRIDELPDGQRYKTSSVLRLIPSSSHHEQHITCQAQNTADRAYRMATV
LIEVKYAPKINITMSTGVVSEGGEVRVRCSVDANPPPQIYRWYLNNKLLVGDYNEELVSH
T