New model in OGS2.0 | DPOGS203087  |
---|---|
Genomic Position | scaffold9274:+ 1575-3937 |
See gene structure | |
CDS Length | 675 |
Paired RNAseq reads   | 74 |
Single RNAseq reads   | 320 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002321 (2e-29) |
Best Drosophila hit   | myoblast city (8e-15) |
Best Human hit | dedicator of cytokinesis protein 2 (2e-15) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP004320-PA [Acyrthosiphon pisum] (4e-20) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC012454 [Tribolium castaneum] (9e-25) |
GeneOntology terms    | GO:0006935 chemotaxis GO:0005856 cytoskeleton GO:0042608 T cell receptor binding GO:0051020 GTPase binding GO:0005829 cytosol GO:0005515 protein binding GO:0009055 electron carrier activity GO:0005085 guanyl-nucleotide exchange factor activity GO:0001768 establishment of T cell polarity GO:0030675 Rac GTPase activator activity GO:0046633 alpha-beta T cell proliferation GO:0012505 endomembrane system GO:0001771 formation of immunological synapse GO:0030676 Rac guanyl-nucleotide exchange factor activity GO:0005525 GTP binding GO:0016020 membrane GO:0001766 membrane raft polarization GO:0045059 positive thymic T cell selection GO:0030036 actin cytoskeleton organization GO:0020037 heme binding GO:0005737 cytoplasm GO:0045060 negative thymic T cell selection |
InterPro families   | ND |
Orthology group | ND |
Nucleotide sequence:
ATGTGGAGAGACAGTGGTAGCTTCAGCTGGTGGCAGCGGGGTTGTCCACGACATAGCGGT
CACGTTACGCGAATGGCTGCAACATTGGAAGGTTTTATATACGGTGAGCAGGCTCTACTC
GAGACGACAAATGATGAGCGTTTCAAATTCATGGAAGTTAGCATGAGGGCTCTTTTGGAG
TTAAGAGCTCAGGCCGCGTCCGGAGCCCTGCCTGTAGATCAGCTCCGAAGAGTCGCGAGG
ACGGCTGTCTTCACCATCGACAAGGGGAATAGGACTTTAGGAATGGAGTTGGCGGTCAGA
ACGATCAGCGGCCAGCTGGTGGATCCGTTAACGACGTCTACCTTCAAACTGAACGCCTTA
CACGAGGAGGCCAACTCCAGGATAGATAAGAACATGGAAACGACCCCGACGAGTCGTCCT
TCTAGTCAAATAACCGCCGCCCGCTCCTATACTATAGTGGCTCACGTGAATAATTTCGTG
TGCCGTTTGAGAGACGCCGCCGAGTTATCTCTAGCGCTCCACGACGGCGCCGGCAATAAA
CTGACGGAAAACGCTCTCCCTGCAACGCGATGGCCCCGGCACCCGCACGGATCTGGGCAG
CGACATAAAGAAAGAGCGTCTCTTCCTGGTATGCCACGTGGTCAGGATCGGGTCCATGGA
GCCGCAGAACGTTGA
Protein sequence:
MWRDSGSFSWWQRGCPRHSGHVTRMAATLEGFIYGEQALLETTNDERFKFMEVSMRALLE
LRAQAASGALPVDQLRRVARTAVFTIDKGNRTLGMELAVRTISGQLVDPLTTSTFKLNAL
HEEANSRIDKNMETTPTSRPSSQITAARSYTIVAHVNNFVCRLRDAAELSLALHDGAGNK
LTENALPATRWPRHPHGSGQRHKERASLPGMPRGQDRVHGAAER