New model in OGS2.0 | DPOGS215000  |
---|---|
Genomic Position | scaffold5290:+ 1015-6776 |
See gene structure | |
CDS Length | 2235 |
Paired RNAseq reads   | 1105 |
Single RNAseq reads   | 3357 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012221 (0.0) |
Best Drosophila hit   | transferrin 3 (5e-33) |
Best Human hit | lactotransferrin isoform 2 (4e-22) |
Best NR hit (blastp)   | transferrin [Aedes aegypti] (3e-106) |
Best NR hit (blastx)   | transferrin [Aedes aegypti] (1e-107) |
GeneOntology terms    | GO:0005381 iron ion transmembrane transporter activity GO:0009617 response to bacterium GO:0008199 ferric iron binding GO:0006826 iron ion transport GO:0005576 extracellular region GO:0006879 cellular iron ion homeostasis |
InterPro families    | IPR001156 Peptidase S60, transferrin lactoferrin IPR015560 Transferrin precursor |
Orthology group | MCL18844 |
Nucleotide sequence:
ACAGTTCGCGTATGCGTGCCGCCATCGTTCGCCTCTCAATGTCAGGGCCTTCAGAGTCTC
GGCAGTCCGATCATTTGTGATACAGTGGAATCCAGACTCGACTGTATCATGAGACTGAAC
AGGGGTGATTCAGATTTCGGAGTGTTCTCTGAAGAAGAAATGGTATTGATGGCCCACAAC
CAGCCCAACGACAACCGGGTCGTGGCTTCCATCAAGGACATCCTTAGCAATGGCTCCTAC
GCGTTCGAAGCGGTCGCCGTAGTCCCAGCGAGTCACACTGGAGGTCTAGAGGGTCTCCGG
GGTATGAAGTACTGTCACCCTGGTCTGGATGAAACTGAGGCGCGCTGGTCTCCACGAGTG
CTTAAGACTTTAGAACGAGCTGCAGCCAGAACCGACCGCTGCCCGGATATGGATACCAAC
GGAAAAACAGCTGAGGAAATTGAAGTCCAAACTCTGAACTCTTTCTTCGGCGCTGCTTGT
AGACCTGGACCTTGGAGCGCTAACTCCTCGGTTGATGCTGACCTCAAATCCCGTTTCCCT
AACCTGTGCTCTCTGTGCGGTTCCAACGGAGACTGCTCCAAATACTCCATCGACATGGGC
CCGAACATCGCCAACGTTGACAACAACAACAGACACATCCAGGCCTTGGAGTGTATGAGG
TCCAATGAGAACAACACTTTCGCTTACGTCGCCTGGCAACACGTCCGCACTTACTTTAAC
GTACGAAATCCAAGGATTCGCGGCTCGTATGCTCTGCTTTGCGAGGACGGCTCCCTCCGT
CCTTTGACAGTTGAGGCCACTAACTCCAATGTCTCCCCATGTTCGTTCGTCAGACAGCCC
TGGAGCGCTGTCGTGGCTACCACTACCAGAGCAAACGACGTGAGTGCTGCTCTCAAGACC
TGGTGGCCAACAGGAACCAACCCTGGAGGAGTTTCTTGGCAGTCGTCACTGTACAATAAC
TTGATCGGAGGCGCCCTGAGCATAATTTCTTTTGAAGACAGTCTCCCTGGACCAGGAAAC
TACAGCCAAAGTCGTAATTTCACCGCCATCGACGCCTCCTCATCCTGCATACCAGCTCGT
CGCTGGTGCACCATTTCTAACGAGGAACACAATAAGTGCTCCTGGGTCCGTGCCTCTGCC
TACACCCTGGGCATAGAACCCACAATCTCCTGCCAGATGAGGAACAACATTTTTGAATGT
CTCTCCGATATTAAGGACAACGCTGCAGACTTCATCGCCGCTCCATCCAACTATGGTTAT
CTGTCAAGGCAGCACTACAAGTTGTCGGCTGTGAAACTTGTACAGAACCTTCGCGGGAAC
CCCAACTCCTTTTCCCGAGTTGCTGCCTTCGTCAAAGAGTCCGCTACCAAAGGAAACATC
ACGAGGTTTGAGAATCTTCGAGGCAAGAAGGCTTGCTTCCCGGAGTTCGGTGGAATATCG
TACGTCGCGTTTCTGCGTACGGCGCACGAGCGTTCCATCATCAGCAGCTCGGATTGCGAC
TACGCAAGAGCGGTTGGAGAATTCTTTGACGGGGCCTGCGCGCCTGGAGCCCTGGCTGCT
TCGCATGAAATAGTTCAAAGCTCATACAACGCGACGAATTTATGCTCACTCTGCAAGCCG
GCTGTCAATGTTAACGATTCAAATTTCACCTGCGCGTTCGACTACACCAACATGTACTAC
GGTAACAACGGCTCCATCAACTGCCTCGCCGATCCTACCACCGATGTGGCTTTCGTCGAA
CTGGACGGTATTCAAGCTCATCTGGACGCTGCCAAACTTCAAGCATCTGATCTGAGAGCG
CTGTGCAGGGATAACACCCTCGCACCCAGCGCAGGAGTTCAGGTTCCCGACAGCTGTCTA
CTTGCGAGCGTTGTTGATTCAGAGGTTCTTGCAAGAAGAAACGATCCTCTCGCGAACAGC
CTCAACGTTCTGCTGGACAACTTGGACTCCTACTTCGGCTACAACGCCGCTAACGCCAAG
CAGCTCATCAACCTAGAAATTTACTCGCCATTCGACAAAGTCAGTGACCTTTTATTCAGA
AATACAGCCATCGGTCTCACGGAACCGTCAGACAACGCAATAAACGCTGAAGCGAGGAAC
TACAACGAGCTCTTCCGTCACCTGGAGTCCTGCACTGGTTCCACGCCTCCCCTCCCAGGT
CTGGCGACCAAAAACTTCTTCTCGCTTGTGACTTTGTTAGGCACAGCACTTATAACCCGT
TTCGTCCTGTACTAA
Protein sequence:
TVRVCVPPSFASQCQGLQSLGSPIICDTVESRLDCIMRLNRGDSDFGVFSEEEMVLMAHN
QPNDNRVVASIKDILSNGSYAFEAVAVVPASHTGGLEGLRGMKYCHPGLDETEARWSPRV
LKTLERAAARTDRCPDMDTNGKTAEEIEVQTLNSFFGAACRPGPWSANSSVDADLKSRFP
NLCSLCGSNGDCSKYSIDMGPNIANVDNNNRHIQALECMRSNENNTFAYVAWQHVRTYFN
VRNPRIRGSYALLCEDGSLRPLTVEATNSNVSPCSFVRQPWSAVVATTTRANDVSAALKT
WWPTGTNPGGVSWQSSLYNNLIGGALSIISFEDSLPGPGNYSQSRNFTAIDASSSCIPAR
RWCTISNEEHNKCSWVRASAYTLGIEPTISCQMRNNIFECLSDIKDNAADFIAAPSNYGY
LSRQHYKLSAVKLVQNLRGNPNSFSRVAAFVKESATKGNITRFENLRGKKACFPEFGGIS
YVAFLRTAHERSIISSSDCDYARAVGEFFDGACAPGALAASHEIVQSSYNATNLCSLCKP
AVNVNDSNFTCAFDYTNMYYGNNGSINCLADPTTDVAFVELDGIQAHLDAAKLQASDLRA
LCRDNTLAPSAGVQVPDSCLLASVVDSEVLARRNDPLANSLNVLLDNLDSYFGYNAANAK
QLINLEIYSPFDKVSDLLFRNTAIGLTEPSDNAINAEARNYNELFRHLESCTGSTPPLPG
LATKNFFSLVTLLGTALITRFVLY