New model in OGS2.0 | DPOGS201685  |
---|---|
Genomic Position | scaffold32188:- 454-2062 |
See gene structure | |
CDS Length | 1545 |
Paired RNAseq reads   | 1312 |
Single RNAseq reads   | 3090 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010788 (2e-27) |
Best Drosophila hit   | ND |
Best Human hit | RNA-binding protein 34 isoform 1 (6e-12) |
Best NR hit (blastp)   | ND |
Best NR hit (blastx)   | PREDICTED: similar to RNA binding motif protein 34 [Apis mellifera] (5e-12) |
GeneOntology terms    | GO:0003676 nucleic acid binding GO:0000166 nucleotide binding |
InterPro families    | IPR012677 Nucleotide-binding, alpha-beta plait IPR000504 RNA recognition motif domain |
Orthology group | MCL25336 |
Nucleotide sequence:
ATGGATTACGTTGTGGGCAGTGTGGCCTCTTTAATATCTGGTAACGTGACACCCAATCGT
CCAAAACGATCAAAGAAACCTCTTACACCTATGAAACATCAAGTTTCGCCAAACGTGACT
CCAAAAAGTCAATTGGTGGATGATAAATCTGTGTTTCTTTCACCGACAATGCAAAAGAAG
AAAGCTATTGTTAAAAAATCACCTAAAAGGATATTTCAAAATAATGACCTTGATGTAACG
AATGAGGAAGGTGAATCAAATTTTTCGAGTCCGAAAGCGGACAAGGTAAAAAAACATTTA
AAAGATGAATTAGAAACAGACACCTCAGCTAGTCAAGTTTTGAAAAATTCGAAATCCCCT
AAAAACAATGATAATGCAATAGCTGAAGACGAAAATTCCTCGAAAAAGAAAAAGAATAAA
AAGATGTCACTAACAGCACCTGACACCGAAGCATTAGCAGACGAAAGTATTGAGAATAAT
AAAGAAAATAATGAAAATGTGGATAATATTGAACAGTCCAAGTCTAAAAAGAAAAGGAAG
AGATCAAAATCAGTGTCAGAGAAGGAAGACACAGAAGTAGATGAAAATATCGTAAATGAA
ACTGACTCAGTCAAAAATGTCGTAAAACCTGACGAGTCCAGTGAAAATAAAAGTCCTAAA
AAGAAAAAGAAATCTAAAGCTTCAGCGGAAAAAGAGGACTGTGAAAAATCTGAAAATGCT
ACTTATAATAACAAGAAAATAGAAAATGAAGCTGATAACAACGAAAGTAAGAGCTCTAAA
AAGAAAAGAAAACGATCAAAATCAGTGGCAGAGAGAGAAGACACGGAAAATGACGTAATT
GAAAGAGACTCAAACAGTCAAGTCGAAAAATCTGAAGATTCAAGTGGAAATAAGAGTCCT
AAAAAGAAAAGAAAGAGATCAAAATCATTAGCAGGTACAGAACAAGCTGAAGCAAATCAA
ATTGCAGGAGACGGGTCCAGCAGTGGAAAGACGGAAGATGAGGTGGAAGAACAAAATAAA
AGCATTGATAAAGATACGAAACACAAAAACAAGAAGAAAAATAAGAAAACATCAAAGAAA
TCAGAAAACACAAGTGAAGTGAACCCCAATGCAATTACTAACAAAGATTCAGACTCCGAG
CACGAATCTGATGATGAGATGCACTCGGACAATGAGGAAGAAAATAAAAAAACTCTCAGC
ACTGATCCTGTTGAAGAAAGTTCCGATGAAGAAGAAGCTCCCAACAAGAAAGAAGCAAGT
AAAGAAAAGAAAGAAGATGAAGTACATCAGGATACAGAGGACGAAATACAAAGAACTATA
TTTGTGGGCAACGTACCCTTCAGCACCAAGTGTAAGAAGGAGCTGAAGAAAATTTTCAAC
CAGTATGGACAAATTGAAACTGTTCGGATTCGGACGGTGCCGGTCAAGGATGCACGGGTG
ACGCCGAAGATGGCTGTCATCAAGAACGAGCTCCATCCAGACCGCACTACTGTCAATGCT
TACATCAAGTTTGCTGATGCCGCCTCCGTCAGTAAGGTAAATTGA
Protein sequence:
MDYVVGSVASLISGNVTPNRPKRSKKPLTPMKHQVSPNVTPKSQLVDDKSVFLSPTMQKK
KAIVKKSPKRIFQNNDLDVTNEEGESNFSSPKADKVKKHLKDELETDTSASQVLKNSKSP
KNNDNAIAEDENSSKKKKNKKMSLTAPDTEALADESIENNKENNENVDNIEQSKSKKKRK
RSKSVSEKEDTEVDENIVNETDSVKNVVKPDESSENKSPKKKKKSKASAEKEDCEKSENA
TYNNKKIENEADNNESKSSKKKRKRSKSVAEREDTENDVIERDSNSQVEKSEDSSGNKSP
KKKRKRSKSLAGTEQAEANQIAGDGSSSGKTEDEVEEQNKSIDKDTKHKNKKKNKKTSKK
SENTSEVNPNAITNKDSDSEHESDDEMHSDNEEENKKTLSTDPVEESSDEEEAPNKKEAS
KEKKEDEVHQDTEDEIQRTIFVGNVPFSTKCKKELKKIFNQYGQIETVRIRTVPVKDARV
TPKMAVIKNELHPDRTTVNAYIKFADAASVSKVN