DPGLEAN00573 in OGS1.0

Genomic Positionscaffold54:+ 34767-48846
See gene structure
CDS Length2439
Paired RNAseq reads  243
Single RNAseq reads  620
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA011022 (0.0)
Best Drosophila hit  suppressor of variegation 3-3, isoform B (2e-107)
Best Human hitlysine-specific histone demethylase 1A isoform b (3e-120)
Best NR hit (blastp)  lysine-specific histone demethylase, putative [Ixodes scapularis] (4e-146)
Best NR hit (blastx)  PREDICTED: similar to Lysine-specific histone demethylase 1 (Amine oxidase flavin-containing domain protein 2) (BRAF35-HDAC complex protein BHC110) [Apis mellifera] (2e-135)
GeneOntology terms







  
GO:0016577 histone demethylation
GO:0003824 catalytic activity
GO:0005634 nucleus
GO:0045449 regulation of transcription
GO:0055114 oxidation reduction
GO:0008152 metabolic process
GO:0016491 oxidoreductase activity
GO:0050660 FAD binding
GO:0005488 binding
InterPro families




  
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding
IPR006207 Cystine knot, C-terminal
IPR007526 SWIRM
IPR002937 Amine oxidase
IPR004133 DAN
IPR009057 Homeodomain-like
Orthology groupMCL15201

Nucleotide sequence:

ATGGCTTTTTTTAGCAAAACCATAGCAATTTGCATTTTGGAAGTTTTATTTCTTCTTACA
TTAAAGTGTTATGCAGATGAAAATTGTGAAACTCTTCCAACAGAAATTCACGTAACAAAA
GAGGAATATGACGATATGGGAAGTTTAGTGAGATCTTGCAGCGGAGAAGTTAATGTCAAC
AAATGTGAAGGGATATGCAACAGCCAAGTTCAGCCATCAGTTGTTACACCCACAGGCTTC
CTGAAGGAATGTTTCTGCTGCAAAGAGAATTACCTAAGAGAACGTCTGGTAACACTAACT
CATTGTTATGATGCCGATGGCTTGAGACTTGTTGATGAAGACCGTGCTATAATGGAACGC
GTTGTGATAATAAAGCTCACGGTTCCTTGGGAAACCAACATCCCCAAAGACCATGTCATC
AAGGTCAACAAGTTTTACGAGCTCACTAACGAGCTCACTAACGAACTCACTAAGAAAAGG
CTCCTCGTAAATTTGTACATGGTAGAAGTAGGAAAGAGTGGTATAACAGCTAAATCTCTC
TACAACCTGCTAAAAGATTTGGGAATGCCAAGGACTAACGTCAGTTCATCAGTCTTGGAA
CGTGCGTCGAAGGCACTAGTAGGAACAAAAGACGTTAATGGGCAAGAAATACAATTGCCT
CCTGGTCAAGAGTGTCAAATGACTCCCGTAATACATGTTCTTCAACACCCTGGGTGCGTT
CCGAAACCGATTCCATCTTATGCTTGCATTGGAAAGTGCACAAGCTATGTACAAGTGTCT
GGAAGTAAAATTTGGCAGATGGAACGTTCTTGCAATTGTTGCCAAGAATCTGGAGAACGA
GAAGCATCTGTGGTTCTTTTTTGCCCAAAAGCAAAGAGCGAGGAAAAGAGATTCCGCAAG
GTATCTACAAAAGCTCCTTTGGAATGCATGTGTCGTCCTTGTGGCAGCGTAGAAGAAAGT
TCTATCACAAATTCGAGTCCAACGTCTGTTACTGGACGGCGGGAATCATCTTCCAGTCGG
ACTGTGGATTCAAAAAAAGAAGACAAACCAATTATTATTGAAGAAACCAAAAGTGAAGAT
ATTGAAGAAGTTAACTACAAAGATATGTTAAATAGCTTGGAAGGTGCTGCATTTCAATCT
AGACTACCATTTGATAAAATGTCTTCATTAGAGGCCGAATGTTTTTCGGATTTGCAAGGA
GCATCAAGCCTTGCACTTGTTCAAATAAGAAATCGAATATTGAAACTTTGGTTTGAAGAT
CCTAAGAAACAGCTCACTCAAGAACAGTCCGTTCAAAAAATGGAACCACCATACAGTGCA
GATCCTGCCTTAGTGATGAGAACTCATGCTTTTCTGGAACGACATGGTTTTATAAATTAT
GGTATTTATGAACGAGTAAATCCTATTCCATCACCACCAAAGGGTAAACAAAGACCCAAG
GTCATAATTATTGGTGCAGGAGTATCAGGCTTGGCAGCTGCACGTCAGTTGCAATCCTTT
GGATGTGAAGTAGTAATATTGGAAGGGAGAGACAGAGTTGGAGGCAGGGTTGTCACTTAC
CGGAAGGGACCTTATGTTGCTGACTTAGGAGCAATGGTGGTAACTGGATTGGGTGGTAAT
CCTGTTACAACGTTGTCAGTACAAATGAACATGGAGTTGCATAAGATAAAACAAAAATGT
CCATTGTATGAAGCGACCGGTAATCAAGTCCCTAAACATAAGGATGAAATGGTTGAGCGT
GAATTCAATCGCTTGCTGGATGCTACCTCATACCTATCACATCAAGTAGACTTTAATTAT
TACAACGATACTCCCGTGTCTTTGGGACAGGCTTTGGAATGGGTCATTAAATTGCAGCAA
AAGAGTGTTAAACATAAACAGATTCAACACCTTAAAGCATTGATAACCTTGCAAGAGAAG
CTAAAGAATAATATCAACAAGATGTCAGATATAAACGAACTCCTTAAGTCTATGAAATCT
GAGAAGGAGACGTTGTTGGCTGATCGCGAGAAGGTAGCGTCTGGAGACGCTAGTATCTTG
CAGGAGTTTAATCTTAGAAGATTAAACCGGGAGATGAATCTGCTGTGTAACGAGTATGAG
ACGCTCACCACACAGAATAATACTATAGAGGATAAGTTGGTGCAGTTGGAATCTAATCCG
CCGAGTTCGGTGTACCTCTCGGTTCGAGATCGTCAGATTCTTGACTGGCATTTCGCTAAC
CTGGAGTTCGCGAACGCAACGCCTTTAGGAAACCTGTCGCTGAAGCACTGGGACCAGGAC
GACGACTTCGAGTTCACTGGGAACCATCTAACAGTTCTTCAAAATTTACGACATCGTTGT
CATTTGAAGCGAGCTTTTGCATCTCGGCAATCTGTGAAGGGTATGGAACACGAGGACATC
AATCTGGTTGCTGCGAAGGCGTGGGGCGTGGATGAATAA

Protein sequence:

MAFFSKTIAICILEVLFLLTLKCYADENCETLPTEIHVTKEEYDDMGSLVRSCSGEVNVN
KCEGICNSQVQPSVVTPTGFLKECFCCKENYLRERLVTLTHCYDADGLRLVDEDRAIMER
VVIIKLTVPWETNIPKDHVIKVNKFYELTNELTNELTKKRLLVNLYMVEVGKSGITAKSL
YNLLKDLGMPRTNVSSSVLERASKALVGTKDVNGQEIQLPPGQECQMTPVIHVLQHPGCV
PKPIPSYACIGKCTSYVQVSGSKIWQMERSCNCCQESGEREASVVLFCPKAKSEEKRFRK
VSTKAPLECMCRPCGSVEESSITNSSPTSVTGRRESSSSRTVDSKKEDKPIIIEETKSED
IEEVNYKDMLNSLEGAAFQSRLPFDKMSSLEAECFSDLQGASSLALVQIRNRILKLWFED
PKKQLTQEQSVQKMEPPYSADPALVMRTHAFLERHGFINYGIYERVNPIPSPPKGKQRPK
VIIIGAGVSGLAAARQLQSFGCEVVILEGRDRVGGRVVTYRKGPYVADLGAMVVTGLGGN
PVTTLSVQMNMELHKIKQKCPLYEATGNQVPKHKDEMVEREFNRLLDATSYLSHQVDFNY
YNDTPVSLGQALEWVIKLQQKSVKHKQIQHLKALITLQEKLKNNINKMSDINELLKSMKS
EKETLLADREKVASGDASILQEFNLRRLNREMNLLCNEYETLTTQNNTIEDKLVQLESNP
PSSVYLSVRDRQILDWHFANLEFANATPLGNLSLKHWDQDDDFEFTGNHLTVLQNLRHRC
HLKRAFASRQSVKGMEHEDINLVAAKAWGVDE