| New model in OGS2.0 | DPOGS206369 |
|---|---|
| Genomic Position | scaffold647:+ 38941-39840 |
| See gene structure | |
| CDS Length | 900 |
| Paired RNAseq reads | 419 |
| Single RNAseq reads | 1025 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005768 (2e-151) |
| Best Drosophila hit | mediator complex subunit 27 (6e-73) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 27 (8e-55) |
| Best NR hit (blastp) | mediator complex subunit 27 CG1245-PA-like protein [Plutella xylostella] (4e-156) |
| Best NR hit (blastx) | mediator complex subunit 27 CG1245-PA-like protein [Plutella xylostella] (3e-142) |
| GeneOntology terms | GO:0003712 transcription cofactor activity GO:0006366 transcription from RNA polymerase II promoter GO:0016592 mediator complex GO:0016455 RNA polymerase II transcription mediator activity GO:0005634 nucleus GO:0006367 transcription initiation from RNA polymerase II promoter GO:0006357 regulation of transcription from RNA polymerase II promoter |
| InterPro families | IPR021627 Mediator complex subunit Med27 |
| Orthology group | MCL14362 |
Nucleotide sequence:
ATGAATCAAACAATTAACGTCGAGCAGCTAAACTCTGCACTGACTTCACTTAGAACTCTT
CGATCAAGTGTGAGCCATGTGTTTGAAACTCTATCAAATGGGCTAAGAGCGGACCACGGC
GAGGATGGCAAAGATAAGTTTCTTTTAGAATTGCAAGAACTTTTGAACAATGTAAACATA
AATCTACGTGACTTAGAACAAACAGTTACAGGACTACCCATACCTACAGCGCCATTTAAT
TTGGGTAATACGACATTTTTAAGCCAAGAAACAACACAAGATAGACAGGCTTTGTATACC
CAACTGGTCAATAGTTATAAATGGACCGATAAAATACACGAATATAGTTCATTTGCCCAC
ACGTTGCTGAGTCAAAATTCTCTAAAAAGGTCATATATAAATTCCGGCAGCACCAAGAGA
CGAGGAAAACTACAAAGCAACCACAACGTAGCGCCCTTACAGGTCGACAATGTTATTAAT
AATATAGACCGTTCATACAATGACATGAAAATCACAATTTCACGGCCTTTCGCAAGTAAT
GCAGTGGTTCAAATCAATCTCAGCCATGTTTTAAAAGCTGTGGTTGCATTTAAGGGTCTG
CTAATGGAATGGGTTATGGTGAAAGGTTACGGCGAGACTCTAGACTTGTGGACTGAGTCG
AGGCACCATGTATTTAGAAAAGTAACTGAAAATGCACATGCAGCCATGCTACATTTCTAT
TCTCCAACTCTACCAGAACTAGCCGTTCGTTCTTTTATGACTTGGCTACACAGCTATGTG
AACCTGTTCAGTGAGCCGTGTAAACGGTGTGGTTGTCACCTCCACCATACATCCATGCTA
CCGCCCGCCTGGCGGGACTTCCGCACCCTTGAACCTTTTCACGATGAATGCAAACAATAG
Protein sequence:
MNQTINVEQLNSALTSLRTLRSSVSHVFETLSNGLRADHGEDGKDKFLLELQELLNNVNI
NLRDLEQTVTGLPIPTAPFNLGNTTFLSQETTQDRQALYTQLVNSYKWTDKIHEYSSFAH
TLLSQNSLKRSYINSGSTKRRGKLQSNHNVAPLQVDNVINNIDRSYNDMKITISRPFASN
AVVQINLSHVLKAVVAFKGLLMEWVMVKGYGETLDLWTESRHHVFRKVTENAHAAMLHFY
SPTLPELAVRSFMTWLHSYVNLFSEPCKRCGCHLHHTSMLPPAWRDFRTLEPFHDECKQ