| New model in OGS2.0 | DPOGS206370 |
|---|---|
| Genomic Position | scaffold647:+ 49001-50334 |
| See gene structure | |
| CDS Length | 450 |
| Paired RNAseq reads | 438 |
| Single RNAseq reads | 2610 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005769 (2e-63) |
| Best Drosophila hit | signal sequence receptor beta (4e-44) |
| Best Human hit | translocon-associated protein subunit beta precursor (5e-33) |
| Best NR hit (blastp) | signal sequence receptor beta subunit [Bombyx mori] (2e-74) |
| Best NR hit (blastx) | signal sequence receptor beta subunit [Bombyx mori] (1e-63) |
| GeneOntology terms | GO:0005786 signal recognition particle, endoplasmic reticulum targeting GO:0005048 signal sequence binding GO:0006621 protein retention in ER lumen GO:0005783 endoplasmic reticulum GO:0016021 integral to membrane GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR008856 Translocon-associated beta |
| Orthology group | MCL13936 |
Nucleotide sequence:
ATGGACATTTTAATAAAGTACACATTATTCAACGTGGGTACAGCCCCAGCTGTGGATGTT
AAACTTGTAGATAATGGATTCCATCCCGAAGTTTTCGCAGTGGTTGGAGGACAGCTCTCA
GCTCACATAGACAGGATACCACCCCAAACTAATGTCTCACACGTCGTTACTGTAAGATCC
AACAGATATGGCTACTTCAACTTCACAGCAGCAGAAGTAACATACAAACCCAGTGAAGAT
TCTGCCGAGGTTCAATACTCAATCAGTAGTGCCCCCGGTGAAGGCACAATCGTAGCCTTC
AAGGACTATGACCGCAAGTTCTCATCTCACATCCTGGACTGGGCGGCCTTTGCTGTTATG
ACACTCCCATCACTGGCTATCCCCTTCGGACTTTGGTATTCATCTAAGAGCAAATACGAG
AAACTCTCGAAACCTAAAAAGACTCACTAG
Protein sequence:
MDILIKYTLFNVGTAPAVDVKLVDNGFHPEVFAVVGGQLSAHIDRIPPQTNVSHVVTVRS
NRYGYFNFTAAEVTYKPSEDSAEVQYSISSAPGEGTIVAFKDYDRKFSSHILDWAAFAVM
TLPSLAIPFGLWYSSKSKYEKLSKPKKTH