| New model in OGS2.0 | DPOGS210798 |
|---|---|
| Genomic Position | scaffold1709:+ 6858-12306 |
| See gene structure | |
| CDS Length | 2091 |
| Paired RNAseq reads | 10602 |
| Single RNAseq reads | 25907 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007114 (0.0) |
| Best Drosophila hit | eIF3-S9, isoform B (0.0) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit B (0.0) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit B [Bombyx mori] (0.0) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit B [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003743 translation initiation factor activity GO:0005852 eukaryotic translation initiation factor 3 complex GO:0006446 regulation of translational initiation |
| InterPro families | IPR011400 Translation initiation factor eIF-3b IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait IPR015943 WD40/YVTN repeat-like-containing domain IPR013979 Translation initiation factor 2A, beta propellor-like domain |
| Orthology group | MCL14348 |
Nucleotide sequence:
ATGGCAAAGAAAAAAGGCGATGAGAAAGTGAATCAAAACCCACAAAGTGATAATGAAGAA
CAAAACTTTGACGAAGAGCCTAATTTTGACGATCCAGAAGGTTTCGTTGATGACATTACA
GACGAGGAGTTGTTAGCGGACCTGTTAGAGAAGAAGCCTAAGGAATCCGACGGCTACGAG
AATGTGATCATCGTAGACGGATGCCCGCAGGTCGGGCCAGAGCGTTTAGAGAAACTCCAG
AGCGTTATAAACAAGATCTTCAGCAAATTTGGCAAAATTGTCAATGAGTATTACCCGACC
ACCGAGACCGGAGTAACTACAGGTTACATTTTCCTGGAGTACAGTAATCCACAGAACGCC
GCTGAAGCTGTGCAGGCCACAAATAATTGTAAATTAGATAAGCAGCATACATTTTTAGTG
AATCTATTTACAGACTTCAAAAAGTATGCTGACATTCCCAAAGAATGGGAACCTCCTTCC
CCTCAGCCTTTCAAGGTGCAGTCAGACCTACAATGGTATTTGATGGACCCTGATGCTTAC
GACCAATTCCTTGTGGGTATTGGAACTGGTGTAGCATTACAAGTATGGCAGAATGCATTG
CCTGAACCCGTTGTACTGCAGGAGAGACCTAATTGGACTGAAACTTATGCTGTTTGGTCA
CCTCTTGGTACATATTTGGCGACTTTCCACTGGCGCGGTGTTGCACTATGGGCGGGTCCT
AAATTCAGTCAATTCCAAAAGTTCTATCATCCCGAGGCGAGATTCATTTCATTTTCACCC
TGTGAGAACTATATCGTTACCTTCTCACCCAGCGGCGACAGGGGTGACGATAAGAAGTTA
ATTATATGGGACATAAGAACAGGTCAAGAAAAACGTAGTTTCCCACCTCCGGATGAGTAT
GTAACCTGGCCGATATTCCGTTGGAGTAAGGATGATAAGTTCTTTGCAAGATTGGGACCG
GATATGCTCTCTGTTTATGAGACGCCGAGCTTTGGTCTTCTCGATAAGAAGTCCATTAAG
ATACCCGGTATACGTGACTTCTGCTGGTCACCATCGGATAACACCCTGGCTTACTGGGTC
GCTGAGGACAAAGACGTACCGGCGAGAGTCACTCTGCTAGAACTCCCCAATCGTACGGAG
ATACGCTCAAAGAATCTGTTTTCCGTCGCCGACTGCAAAATTCACTGGCAGAAGAGCGGC
GACTACCTCTGCGTCAAAGTGGATCGCTACTCCAAGGTCAAGAAAGACAAGAACGAGATC
AAATACTCCGGCATGTATTACAATTTTGAGATATTCCATATGAGGGAGAAAGAAATACCA
GTGGACTCTGTGGAAATCAAGGAACCTATACAGGCGTTCGCGTGGGAGCCCATAGGGGTG
AAGTTCTCGATAATTCATGGCGATACAGCGAACACCTGTATAAGCTTCTACCAAGTCAAC
ACCGGCCAGGCTCCTACGTTGCTGAAGAAGTTCGAAAGGACTCCCTTCAATCACCTGTTC
TGGTCTCCGATGGGCCAGTTCATTGTACTCGCAAATCTCGGCCTGACAGGAGGTGCCTTG
GAATTTTTGGACACCAATGACTTCACAATCATGAATGTCTCCGATCATTATCAGATGTCT
GGCATAGAATGGGATCCGACTGGCCGTTATGTGGTCACAGGAGTATCGTCACTCAAATGC
AAGATGGACTGCGGATACTATCTGTGGTCATTCCAAGGGAAGATTCTCAGACGAGTGATG
AAGGAAGGTTTCGCTCAGTTCCTATGGAGACCTCGTCCCCCGACGCTGCTGTCTGAAAAA
CAACAAAAAGATATCAAAAAGAACCTCAAGAAATATTACTCTCAGTTTGAATCCAAGGAC
CGTATGAGGAGTAGCAAAGCCAGCAAGGAGTTAGTTGCTAAACGGACGGAGCAAATGAAA
AAACACGTCGAGTATCGTGAACAGAAGACATTGGAGTGGGCTGAGCAGAAGCCGCGTCGG
CTCGAATTGAGAAACTATGTCGACACAGACGGTCTCGACACGGACGCGGTTAACTCGGTC
GAGGAGGTTGTAGAATTCTTTATTAAAGAGGAACAGACGGTCGTCGAGTAG
Protein sequence:
MAKKKGDEKVNQNPQSDNEEQNFDEEPNFDDPEGFVDDITDEELLADLLEKKPKESDGYE
NVIIVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTETGVTTGYIFLEYSNPQNA
AEAVQATNNCKLDKQHTFLVNLFTDFKKYADIPKEWEPPSPQPFKVQSDLQWYLMDPDAY
DQFLVGIGTGVALQVWQNALPEPVVLQERPNWTETYAVWSPLGTYLATFHWRGVALWAGP
KFSQFQKFYHPEARFISFSPCENYIVTFSPSGDRGDDKKLIIWDIRTGQEKRSFPPPDEY
VTWPIFRWSKDDKFFARLGPDMLSVYETPSFGLLDKKSIKIPGIRDFCWSPSDNTLAYWV
AEDKDVPARVTLLELPNRTEIRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKNEI
KYSGMYYNFEIFHMREKEIPVDSVEIKEPIQAFAWEPIGVKFSIIHGDTANTCISFYQVN
TGQAPTLLKKFERTPFNHLFWSPMGQFIVLANLGLTGGALEFLDTNDFTIMNVSDHYQMS
GIEWDPTGRYVVTGVSSLKCKMDCGYYLWSFQGKILRRVMKEGFAQFLWRPRPPTLLSEK
QQKDIKKNLKKYYSQFESKDRMRSSKASKELVAKRTEQMKKHVEYREQKTLEWAEQKPRR
LELRNYVDTDGLDTDAVNSVEEVVEFFIKEEQTVVE