| New model in OGS2.0 | DPOGS207626 |
|---|---|
| Genomic Position | scaffold432:- 47187-53654 |
| See gene structure | |
| CDS Length | 4308 |
| Paired RNAseq reads | 843 |
| Single RNAseq reads | 2139 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006009 (0.0) |
| Best Drosophila hit | CG7158 (2e-59) |
| Best Human hit | alsin isoform 1 (1e-170) |
| Best NR hit (blastp) | PREDICTED: similar to alsin, partial [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to alsin, partial [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005085 guanyl-nucleotide exchange factor activity GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0035023 regulation of Rho protein signal transduction GO:0001726 ruffle GO:0007409 axonogenesis GO:0032313 regulation of Rab GTPase activity GO:0016050 vesicle organization GO:0007528 neuromuscular junction development GO:0016197 endosome transport GO:0007626 locomotory behavior GO:0014069 postsynaptic density GO:0043197 dendritic spine GO:0008104 protein localization GO:0035249 synaptic transmission, glutamatergic GO:0001881 receptor recycling GO:0008219 cell death GO:0007032 endosome organization GO:0005097 Rab GTPase activator activity GO:0016601 Rac protein signal transduction GO:0017137 Rab GTPase binding GO:0043025 neuronal cell body GO:0001662 behavioral fear response GO:0050790 regulation of catalytic activity GO:0006979 response to oxidative stress GO:0007041 lysosomal transport GO:0030675 Rac GTPase activator activity GO:0042802 identical protein binding GO:0048365 Rac GTPase binding GO:0051260 protein homooligomerization GO:0005622 intracellular GO:0030027 lamellipodium GO:0005792 microsome GO:0016020 membrane GO:0019717 synaptosome GO:0030424 axon GO:0030425 dendrite GO:0030426 growth cone GO:0005634 nucleus GO:0005829 cytosol GO:0005769 early endosome GO:0005813 centrosome GO:0005515 protein binding GO:0005737 cytoplasm |
| InterPro families | IPR009091 Regulator of chromosome condensation/beta-lactamase-inhibitor protein II IPR011993 Pleckstrin homology-type IPR000408 Regulator of chromosome condensation, RCC1 IPR003123 Vacuolar sorting protein 9 IPR003409 MORN motif |
| Orthology group | MCL15277 |
Nucleotide sequence:
ATGCCTCAAATATCTTTAGATACAAATACTATAAAGCGAGTTCCATTCTTTGAGGGCAGG
ACAGTATACAGTGCTTCAATCGGCCAAAACTTTGCAGCTGTGATAGCAAGAAAAAATGTG
AAACAATCAGGTAATTGTGACACTGACAGTGAAAATGATGATGAAGAGGTTTTTGCTTCT
AATTGTTCACAATGCCAAACAATCATTGGTCTTGCCTCCCCTGCTTCTGTACCATCATTG
TCAGAGACATGTCCACTCGGAGTTCACATAAGCAAGTCCAGTGAAGATTCAAGTAGCACA
ACTGCACCTCAAACAGACGTCCACATAGATGCTCAAAGTTTTACAGAAGACTCCAGCCCA
TCATCAGAAGAGTCAAAAGTAGCAAAATGTGATGCTGCACAGTATATGAGTAACAATTTA
GAAGATAATGAAGTTCAGATTACAGAAGATGATGTACAAACTGAAGATCCTCACAAACCT
CATGCAAGTGAAGAAAAAATCAATAATATATTCATAAATACAGATGCTGCAAGACAATTT
TTAAGCAGACAATTGTCTTGGGTGTCGGCTGGTGAGGATTACCTTGTTGAATATACAGAG
AAGCCAACAAGAATAATTAAGGAAAATGTGTCCAATCTCACAAACTTTGTTTACGAAGGC
GTTAAAACTGTTGGTGATAAAGTAGCAACATTATCAAGACACGTTAGTGGAAGCAGTGAT
AATAACGACACAATGGAACTTCCTAATCCAAATTTTAATGAGGAGCTAAGTTCTCTTCTA
TACAGTTGTAACTCTAACAAGTTTGAAGACCTTCAATTTTCAACGAGCACAATCAGTAGT
GAAAAAGAATTTGAAGCAACAAGAAAAACTGAAAATATCAAAAACATGTCAAAATTAGGT
AAAAATATATTGGCAACTGAATTATGGACTTGGGGTGACATAACTCATGGGCAATTGGGT
ATAGGTGATACAATGAAAAGGGTGAAACCCATGATCGTGATGAGCCTATCAGGTTTTGGC
TTACAAAAGGTGTCCTGTGGTAAATGGCATTGTGCGGCGTTAACTTTAGACGGGCGGCTA
TTTTTATGGGGTTACAATCACTTTCAACAAGTTAGTTTAGAATCTAGGGAAGATAAGAGT
GGACCTAAGCAGTTTACCGAAAATTCTGATAGTGATCGCGTAAGAGACATGATAGCCACC
GATCACCACACACTTGCCTACACACATAATGAAAATGTTTATTACTTAGGTAAACATACA
GATGGCTTCACAGAAAATGTTGTCAATTTAAATGAAAAATGTGAAGTTGTGGATGAAAAA
TCTAAAGAGACTACAGTTAAATTGAGTGAAACTAAAAGTCATGTGAATAAAACTGAAAAC
ATGTGCTATCATTGGAGAGTGTTATCTGAAGAATCGTCTATTTGTCCGGAGTTTCAAAAT
TTGTCAATTGCTCAAAGGTACTTAGAAGAGATGTTATTGATATATCATTCTTTGGTTAAG
CCTTTCCTTAAGAAAAGCAAATCTATTACATTACATTCCAACGTGTACGAAACTGTTTGT
GATATATTCGGTGACATATTATATATAACGGCACTGAATGTGCTATCAACATGGCAATAT
GCTGAGAAGCACATAAGTGAATGTGATATTTCTTTAATAAAAAATCTAGAAGAGTTTATT
TTTTTATATAAAAAGTATTATTTAGCTGTAAGCAATTTGATTGTTATTGGTGGTTTCGCT
CACATAAATAATATTGTGGATGTGCCGTCAAGTATTTATAATTTATTTAGTGACCAGCTA
CCAACGAATAAACAAAAATATAATAAGAAGACATTAGAAGTAGTTGTAGCGTTAGCCTTT
GTTCAGCCATTAACGAGATTAAGCTCTTACAAATGTATTGCTCAATCTTTGATACGCCAT
AAATTGAAGAGAAAAAAACATGATTCTAAAACGAGTATTGAGGAAAAAATCAATAAAGTG
ATATCTTCCTTCGACGGTTTAATAGAAGAACAAGAAAAGAAACGAAAAGAAGCAGAAGGT
ACAAAGCTGTTCTGGGAAACCCTTGGAAAAAGTTTAGATCAATATAGAACACCCGAAAGA
CGTCTCATAAGAGATTCAAAAAGCCGGCCCCTTAATCTTGTTAATCCTGGCAGGTTTAGC
AGCCATTGGTTCATTTTGTTCAATGATTTGTTCGTTCACGTAAACGGGAGTACAGCAAAC
ATCCATCCATTAGAAACGCTATGGATTGAAGCTGTGCCAAACACAGATTCATTGCAAAAC
GTCATACAGTTAACAACCCCGGAGGAGGTTATATGCGTTTCGACAATATCTGAACAAGAA
AAAACAGAATGGATACATAGCCTGAATGCATCCATTCGAACGGCCTTAAATAAAGAATCT
GCTTTCAAACCTCCGTCGATAAGAACAGCTAGTTATACATTTTCTTCTAAGAATATTTTT
TATAAAGACGCTAAATATCACGGGAGATGGCTTGACGGGAAAATACATGGCAATGGAAAA
ATCGAATGGCCAGATGGAAAATTTTACGTGGGTCAGGTACAGTTGAACGCTTTATGTGGA
CATGGGAAAATGGAAATTCCTGGAGTTGGTTTATACGAAGGTCAGTGGAAAGATAATCTT
CAAAATGGTTACGGTGTCCTGAAGTACACTACAGGTGATATGTATGAAGGATATTTCAAA
GATGGTCTTCCTCAAGGACATGGTATCAAAAAACAAGGTGATTTCACGTCATCGACCGCA
ACTATTTATACTGGAGAATGGGTGAATGGTGTCAGGCAGGGCTACGGAGTTATGGACGAT
ATTGGTAAAGGGGAAAAGTATCTCGGCAACTGGAGTGATAACAAGAAACACGGATGCGGT
CTAATTGTTACGTTGGACGGAATTTATTACGAGGGTCTCTTTACAGCGGACGTGTTGACG
GGTCATGGTGTAATGGTATTCGAGGATGGTACACATTACGAGGGTGAATTTCGATCAGCT
GGGATTTTCTCTGGTAAGGGAGTTCTCACATTCTCTAGTGGAGATCGAGTGGAGGGTTCT
CTCAGCGGTGCTTGGACTGAAGGCGTTAAAATATCCAACGCTGTAATGCATTTAAACGTC
TCCAATCCAGTTCTGCCTCCTAACGCTAAGCCTGGGTCGTTCGGCAAATTAAGCGTAGCT
GCGAATCAGAAATGGAATGCTTTATTTCGTCAATGCTATCAGAGCATGGGTGTGTCAGAA
GCGATTCTCACACCGAGCGGTAATCATCTAGCAAACGGATCCTCGAATGTCCCAGACAAC
GTCAAAATATGGCAAAACGTAGCCGTCGCTATATCCAGTTCTCACAAACATTCGAAACCG
GGAAAAAAGACGAGCGGATCTGATGTCGAGAAATCGGTGGACTGCCTGGAAGTTATACCA
GTTTTCGGCCAGAAGACACTAACGTTAACCGACTTCACAGAACTTAAGCAGTATTTATAC
AATGCCTGCGAGTCCAATCATCATCCGCTGGGTCAATTAGTACTGAGTGTAACAAATGCC
TTCAATACCACGTATGGCGGTGTGAGAGTTCATCCGCTCTTACTAAGTCATGCTGTCAAA
GAGCTTAAAAGCATCACGTCAAGACTGTACCAAGTGGTGACACTCCTTTTCCCCGCTTTA
CCATACGAAGGAACTGTTGTGGTGTTGCCAGACACCTCCGATGGAAGCTGTCACGAAAAC
AGTAATCCAATTGATGGGGAGGTGGTGTCGAGCAATTCCTTACTGCAGCCTGTACTGTTG
CCAAGAGTTCACCCCGCCCTGTTCGTGTTATACGCGTTACATAACAAAAGAGAGGACGAT
TTATATTGGCGAAGACTGCTCAAGTGGAACAGGCAGCCGGACACCACGCTGATGGCTTTC
CTTGGGATAGATCAAAAATTCTGGACCGTCCATCGTAACTCACCGTCGCCAATGCTCTCG
CCGTCAAAGGAAGAAGTATTTCAAGAGGCTGTTGAAACTCTCCAGCAATTGAAGACCACA
TTTTCTCCGATAGAGAAACTCCTCGTGATCCGAAGCACTTTCCAAAAGATGACAACAGCG
GTGCAACACGAATTAGGGCAACATTATCTGTGGAATATGGACGAACTGTTCCCTGTATTT
CACTTCGTCGTTGTGAGAGCTCGTATTCTTCAGCTTGGTTCAGAGATACACTTCGTGGAG
GACTTCCTGGAGCCCGGGACTCAGTGCGGTGAACTAGGACTCATGTTTACTACACTGAAG
GCATGCTACTTCCAAATTCTACAAGAGAAAATGTCGATCAACACCTAA
Protein sequence:
MPQISLDTNTIKRVPFFEGRTVYSASIGQNFAAVIARKNVKQSGNCDTDSENDDEEVFAS
NCSQCQTIIGLASPASVPSLSETCPLGVHISKSSEDSSSTTAPQTDVHIDAQSFTEDSSP
SSEESKVAKCDAAQYMSNNLEDNEVQITEDDVQTEDPHKPHASEEKINNIFINTDAARQF
LSRQLSWVSAGEDYLVEYTEKPTRIIKENVSNLTNFVYEGVKTVGDKVATLSRHVSGSSD
NNDTMELPNPNFNEELSSLLYSCNSNKFEDLQFSTSTISSEKEFEATRKTENIKNMSKLG
KNILATELWTWGDITHGQLGIGDTMKRVKPMIVMSLSGFGLQKVSCGKWHCAALTLDGRL
FLWGYNHFQQVSLESREDKSGPKQFTENSDSDRVRDMIATDHHTLAYTHNENVYYLGKHT
DGFTENVVNLNEKCEVVDEKSKETTVKLSETKSHVNKTENMCYHWRVLSEESSICPEFQN
LSIAQRYLEEMLLIYHSLVKPFLKKSKSITLHSNVYETVCDIFGDILYITALNVLSTWQY
AEKHISECDISLIKNLEEFIFLYKKYYLAVSNLIVIGGFAHINNIVDVPSSIYNLFSDQL
PTNKQKYNKKTLEVVVALAFVQPLTRLSSYKCIAQSLIRHKLKRKKHDSKTSIEEKINKV
ISSFDGLIEEQEKKRKEAEGTKLFWETLGKSLDQYRTPERRLIRDSKSRPLNLVNPGRFS
SHWFILFNDLFVHVNGSTANIHPLETLWIEAVPNTDSLQNVIQLTTPEEVICVSTISEQE
KTEWIHSLNASIRTALNKESAFKPPSIRTASYTFSSKNIFYKDAKYHGRWLDGKIHGNGK
IEWPDGKFYVGQVQLNALCGHGKMEIPGVGLYEGQWKDNLQNGYGVLKYTTGDMYEGYFK
DGLPQGHGIKKQGDFTSSTATIYTGEWVNGVRQGYGVMDDIGKGEKYLGNWSDNKKHGCG
LIVTLDGIYYEGLFTADVLTGHGVMVFEDGTHYEGEFRSAGIFSGKGVLTFSSGDRVEGS
LSGAWTEGVKISNAVMHLNVSNPVLPPNAKPGSFGKLSVAANQKWNALFRQCYQSMGVSE
AILTPSGNHLANGSSNVPDNVKIWQNVAVAISSSHKHSKPGKKTSGSDVEKSVDCLEVIP
VFGQKTLTLTDFTELKQYLYNACESNHHPLGQLVLSVTNAFNTTYGGVRVHPLLLSHAVK
ELKSITSRLYQVVTLLFPALPYEGTVVVLPDTSDGSCHENSNPIDGEVVSSNSLLQPVLL
PRVHPALFVLYALHNKREDDLYWRRLLKWNRQPDTTLMAFLGIDQKFWTVHRNSPSPMLS
PSKEEVFQEAVETLQQLKTTFSPIEKLLVIRSTFQKMTTAVQHELGQHYLWNMDELFPVF
HFVVVRARILQLGSEIHFVEDFLEPGTQCGELGLMFTTLKACYFQILQEKMSINT