| New model in OGS2.0 | DPOGS207638 |
|---|---|
| Genomic Position | scaffold432:+ 55431-58428 |
| See gene structure | |
| CDS Length | 1014 |
| Paired RNAseq reads | 13450 |
| Single RNAseq reads | 30740 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006141 (2e-170) |
| Best Drosophila hit | eukaryotic initiation factor 3 p40 subunit, isoform B (4e-121) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit H (8e-78) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit H [Bombyx mori] (0.0) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit H [Bombyx mori] (1e-168) |
| GeneOntology terms | GO:0005852 eukaryotic translation initiation factor 3 complex GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0005829 cytosol |
| InterPro families | IPR000555 Mov34/MPN/PAD-1 |
| Orthology group | MCL15689 |
Nucleotide sequence:
ATGGCGAGTCGCGGTGGCCCATCTAGACGCGTTCCTGAAAATGAAGATGCCATTACATAC
GTTCAGTGTGATGGACTGGCGGTGATGAAAATAGTGAAACACTGTCATGAAGAATCATGC
AGTAATATGGAAGTGGCTCAGGGTGCCCTACTCGGGCTTGTGGTTGAAAATCGATTGGAG
ATAACCAATTGCTTTCCATTCCCCAAACATGATGATACGATGGACGAGGAGGAGTATCAG
CTCGACATGATGCGGAGATTACGTAGAGTTAACGTTGATCACTTCCATGTTGGATGGTAC
CAGAGTGCAGACGTGGGTAACTTCTTAAGTGAATCACTGTTAGAGTCCCAGTATCACTAT
CAGACATCCATCGAGGAAAGTGTTGTTGTTATTTACGACACTAAGAAGTCCGCTAGAGGC
TTCTTGACTTTGAAAGCTTATCGTCTTACTCCTCAGGCGATTGCCATGTACAAAGAGAAG
GATTACACGCCAGAGGCATTGCGTAACCTTAAAATAGGTTATGAGAACCTGTTCATTGAG
GTTCCCATTGTGATCAGGAATTCACCGCTCACTAACATTATGATGTCCGAGATATCCGAG
ATGATCCCAGAAGAAGAAGGATCTAAGTTCCTTGATTTAGGAACAGCTTCCGTGCTTGAA
GGACAACTCCGAAGTCTAATGGAGCGTGTGGACGAATTGAACCAGGAAGCAATAAAGTTC
AACCGTTACCAATTATCAGTTGTCCGTCAACAGCAAGAGAAGCATCGTTGGCTCTTGAAG
CGGGCTCAGGAGAACGCTGCTCGAGCTGCCAAGGATGAAGCGCCTCTACCGGAAGAGGAT
GTGAACAAGCTCTTCAAACCCCTGCCGGTACCACCAAGGATGGTCCCAATGATAGTGGCC
GGCCAAATCAACACTTACAGCCAACACATCAGCCAATTCTGCTCCCAAAGCCTGGCGAAA
CTGTATCTGACACAAGCATTACAGAACGCTAAGGAATCCAAGCAGAACAACTAA
Protein sequence:
MASRGGPSRRVPENEDAITYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLE
ITNCFPFPKHDDTMDEEEYQLDMMRRLRRVNVDHFHVGWYQSADVGNFLSESLLESQYHY
QTSIEESVVVIYDTKKSARGFLTLKAYRLTPQAIAMYKEKDYTPEALRNLKIGYENLFIE
VPIVIRNSPLTNIMMSEISEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIKF
NRYQLSVVRQQQEKHRWLLKRAQENAARAAKDEAPLPEEDVNKLFKPLPVPPRMVPMIVA
GQINTYSQHISQFCSQSLAKLYLTQALQNAKESKQNN