New model in OGS2.0 | DPOGS207398  |
---|---|
Genomic Position | scaffold542:- 12050-25484 |
See gene structure | |
CDS Length | 3015 |
Paired RNAseq reads   | 1821 |
Single RNAseq reads   | 5499 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009367 (3e-33) |
Best Drosophila hit   | yemanuclein alpha (4e-19) |
Best Human hit | ubinuclein-1 (3e-13) |
Best NR hit (blastp)   | GK11190 [Drosophila willistoni] (3e-30) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC008303 [Tribolium castaneum] (5e-20) |
GeneOntology terms    | GO:0003677 DNA binding GO:0005634 nucleus GO:0048477 oogenesis |
InterPro families   | ND |
Orthology group | MCL30897 |
Nucleotide sequence:
ATGTCGGACCCTAAACGTGCTAGTCTTATAACAGCGGGTGCTCCAAAAAGTGCAAAGAAT
AATGTAAATAAAACATTGAGATTGTCTATAAATTTAGACGTAAGTGACGAAACAAAATAT
CCAGAGCTGAATTACAAGGAACTATACGCAGCAGCATTGAAAAAGAAGCGTGGTGAGAAC
TGTAAGACATCAGGTCTTGATCCTTTCTCCGATAATGATGATGATATTAAAAGGGCTACA
AGGAAATTTGAACAGAAATATGGTGGAAAAAGTACATATGGAAAAAAGGGAAGGTCGAAA
TATGATGATTTTGCTGACATTGGAGCTGGCTATGATGAGAATGACTCCTTCATTGACAAC
ACAGACGGTTATGATGAGATAATGCCACCAGAATGTGACACAGAGTATGGAGGTTTCTAT
ATCAACAGCGGGGATCTTGAGTTCAAGACTGTACCTGAAAACAATAAGCGCGGACTATCA
TCAAGCAGTAGTGAGGAGGAGTCGTCTGCGAGTTCTTCGGATTCTGATAGTCAAGAGGCG
AAAGACACAAAGGTCATCACCAATGGGAACGTCGACTCACATAAGACTGAGCATCGGAAA
AAGAAGAACAAGACTATTGACAAGCAGAAAGCAAAGAAGATCAGAAGAACAGATTCCTCA
GCAGCTACATCAGGGAAACAGACATCGGATGAGAACGCCCCCGCGGATGGGTCGACCGGT
GATTCAAGATCGTCAGCTTCCGATTCCCTCACCTCCAAACCAGCTCCTAGCTCGGAGAAC
AACGCCACATCTGATAGTTCGAGAGATGCTGAAACAAAAGAAATCAAACTGCCGGCCTCC
GTGAACCAAATACTGGAAGAGCTGGAGACGCTGAGCAGGTTCAAAGAATATCTCGGGAAG
GATGATAGCAAGACTGAAGCCTGCATCGTTAGATTGGATAAAGCTCTCAAGGAGGTTGTG
GATAATCGTCTGTGTGAACACGCCTGGTCCAGAGCTGCTAAGACGCTGGGAGTTGGACCG
GATGTCATCACGCACAGGGCGAGAGAACGAGAGAAACTTGACAGTGTCCCGGTACAAAAC
TCACAACCTCAGCCCATAGCGGGTACTAAGAGGAAACTGGACGAGCTGTTAGATACAAGC
ACCATGACGCCCGAAGAGAAAGAAGCAAACATAGAGGATGTTTTACAAAGAGAGAGGTGC
TTGGACAGTGGAGGTGAGCGTTTAACGCGCATTAGACAGGGGCCTCTTAAACCTACACCT
GGGTCGCAAGTCCCAGCCGCTGATAGACCATGGAACGCTGAGATGTTAAAGACATTAATA
AAAGAACGTGAACCAGGAATGATGGCTACGTACAAAGCTGAATGTGAACGAGTAGAGGAA
GAGAGGAAGAAGCTGTCGATCGGTTCAGTTTCCGGTGGTAGTACAGGGTCTGAGCGCCGT
CGTCCCAAACGTCGTTTCCCGTGGTGTGCTCGTGCCCGGGCCCTGCTGGCCCGTCTTGCA
GCGCTAGGGGGAGCCCCGGAGCACCCGGCCGCAGCCGCAGCCCTTCTCACTCAGAGAGCT
TTCCCCCTGTTCCCAGACGGCTTTGTACGTCTGCCCACACTACTCAAGCAGGCCGATCTC
AACAAAGACATCAAGGTTTCAGACTTGAAGAAGCAAAGAGTCAGTTCAATATCATCTCAG
GCGGCGCCACAATCTCAGCCTTCACACGCAACTCAACCAGTACAACCTATGATGACCTCT
ACACAGTTCACTGAACCCATACAGTTCCCGAGCTCGCTCACCGTCACAACCTCCGTCAAA
AGTATAGACAGGAGCGAAGACGACAAATACAAAGTGAATCCAGCCATCGGCGCGCTGATA
AACTCGTACACGCTCAACAAAGACCTAGTTATAGAGAAACCGGAAGACAGGAAGACCGAC
AGGAGCAAAGAGGAGTACATCCCCGCGAACAGTATAGGCAGCATCACGATAACACCCGTC
GTCGCTAAGGACAAGAAGGCGGACAAGGCCAAGGAACCCCTGCTGAGAGTCAAGTCACCG
GCCGCCTTGAACGAGATGATACACAAGAAAGATAAGCCCAAGAAACCAGAGAAGAACGTC
ACCCTGTATAGAGATAAGAGATTGGAGTCCCCTCTGCACGTGGATATCAGTGGGAACACC
AAGAAAGATTCCCAGAGCCCCAAACTCAAGGAGGAGATAAGTCAGAAAGTCATCGAGAAC
ATGCGCTCAGTAGAGAACAACATACCCAGGCCGGCCTTGATATCGGTGCACCACTCACCC
ACCTTCGTCAAACCTGACAAGCGGCCGCCGGAAGTCAAGAAGAAGAAGGAACCGTTAATA
ATATCGGACGAAGACCCGCTCAGTGACGTGCGCGAGACGAACGAGCTCGATGATAATAGT
GATGTGGTGTTCATGGGGGAAGTGAGGGACAAGTGTGAGAATAGTGATGTGCCTTCGGAC
GTTAAGAGTGACAAATGTGAGGACCTGACTGACGAGACGGCCAATGAGGTTATGAAGAAT
TTAAGAGAAATGGCGCACTCACAGGAACCCGCGAGCCAAAACAGCAGTTCGTACGGCGGG
GTCATAACAAGTGGGGCTGGTGTCAAGCATTTTTTATTAATACAACGTTTCCCTCGTCTG
CCGGGTCAGGATTTCATTTGTGCTGCGACTGTCGAGATGTTTAACGCACTCGTACAAGAC
TATGGAATGGAGCGGACACCGTGCACACTACACGGCGTCGGGTCAAACACACGTCACACT
GCTTCGCGTACTGAACGCTTACATTATGAACGGAAACAGAACCTGCTTCACCGCGTGTGC
ACCACCAACCTGCACACCGACCGTTCGCAGGTTTTATACTCAAATAACTTTAACATACGT
CCATTGAATACGTCAGGACTCGTGTCCAAGTTGATATGCACCCGCAGTAAGTACAAGAGT
AATGTAACCTCTACACATTACGGACAGAGGTCACTGTCTACCGACACGTTCCCTACAAAC
GATACATTTATTTAA
Protein sequence:
MSDPKRASLITAGAPKSAKNNVNKTLRLSINLDVSDETKYPELNYKELYAAALKKKRGEN
CKTSGLDPFSDNDDDIKRATRKFEQKYGGKSTYGKKGRSKYDDFADIGAGYDENDSFIDN
TDGYDEIMPPECDTEYGGFYINSGDLEFKTVPENNKRGLSSSSSEEESSASSSDSDSQEA
KDTKVITNGNVDSHKTEHRKKKNKTIDKQKAKKIRRTDSSAATSGKQTSDENAPADGSTG
DSRSSASDSLTSKPAPSSENNATSDSSRDAETKEIKLPASVNQILEELETLSRFKEYLGK
DDSKTEACIVRLDKALKEVVDNRLCEHAWSRAAKTLGVGPDVITHRAREREKLDSVPVQN
SQPQPIAGTKRKLDELLDTSTMTPEEKEANIEDVLQRERCLDSGGERLTRIRQGPLKPTP
GSQVPAADRPWNAEMLKTLIKEREPGMMATYKAECERVEEERKKLSIGSVSGGSTGSERR
RPKRRFPWCARARALLARLAALGGAPEHPAAAAALLTQRAFPLFPDGFVRLPTLLKQADL
NKDIKVSDLKKQRVSSISSQAAPQSQPSHATQPVQPMMTSTQFTEPIQFPSSLTVTTSVK
SIDRSEDDKYKVNPAIGALINSYTLNKDLVIEKPEDRKTDRSKEEYIPANSIGSITITPV
VAKDKKADKAKEPLLRVKSPAALNEMIHKKDKPKKPEKNVTLYRDKRLESPLHVDISGNT
KKDSQSPKLKEEISQKVIENMRSVENNIPRPALISVHHSPTFVKPDKRPPEVKKKKEPLI
ISDEDPLSDVRETNELDDNSDVVFMGEVRDKCENSDVPSDVKSDKCEDLTDETANEVMKN
LREMAHSQEPASQNSSSYGGVITSGAGVKHFLLIQRFPRLPGQDFICAATVEMFNALVQD
YGMERTPCTLHGVGSNTRHTASRTERLHYERKQNLLHRVCTTNLHTDRSQVLYSNNFNIR
PLNTSGLVSKLICTRSKYKSNVTSTHYGQRSLSTDTFPTNDTFI