| New model in OGS2.0 | DPOGS200846 |
|---|---|
| Genomic Position | scaffold447:+ 105874-106913 |
| See gene structure | |
| CDS Length | 561 |
| Paired RNAseq reads | 382 |
| Single RNAseq reads | 1202 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009902 (1e-57) |
| Best Drosophila hit | within bgcn (4e-25) |
| Best Human hit | partner of Y14 and mago isoform 2 (1e-15) |
| Best NR hit (blastp) | partner of Y14 and mago [Bombyx mori] (6e-62) |
| Best NR hit (blastx) | partner of Y14 and mago [Bombyx mori] (8e-55) |
| GeneOntology terms | GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0035145 exon-exon junction complex |
| InterPro families | IPR015362 Exon junction complex, Pym |
| Orthology group | MCL15711 |
Nucleotide sequence:
ATGGCGACAACTGCATATCAACATGACGCTGATGGGGCTAAATTTATACCTGCTACACAG
CGCCCCGATGGAACTTGGAGAAAACCTAGACGCATAAAAGATGGTTACGTGCCTCAAGAA
GAAGTGCCTCTGTATGAGAGTAAAGGCAAGCAATTCAAAGCTCGGCAGAGCACAGGTCTC
CCAGTTGGTCTTCCTCCAGAAATAGCCGCTGAAGCCAAAAAATCCAAAAAAGGTGTCATA
CAACCAATACCTGGCATGATTATTAATGTTGAAAAAAAGAAGAAAAAAAAGAAGACAGGT
GTAGATGATGCCGCTGAGAAACTTTCAAAACTTACAACATGCGAGATAATAGAACCCAGC
TTCAAGACAGCCCCGAGTACGACCACCGACCCTGCTAAAAGACTCAAGAACTTAAAAAAG
AAACTGAGGGATATAGAAACACTGGAAGAGAAAATCAAATCTGGTTCCCTTAAAAATCCT
GACAAAGAACAGAAAGAAAAAATTACTAAGAAAAGTGAAATTGTCAAAGAAATAGAGTTA
TTAGAGAAAAATTGCGGATGA
Protein sequence:
MATTAYQHDADGAKFIPATQRPDGTWRKPRRIKDGYVPQEEVPLYESKGKQFKARQSTGL
PVGLPPEIAAEAKKSKKGVIQPIPGMIINVEKKKKKKKTGVDDAAEKLSKLTTCEIIEPS
FKTAPSTTTDPAKRLKNLKKKLRDIETLEEKIKSGSLKNPDKEQKEKITKKSEIVKEIEL
LEKNCG