New model in OGS2.0 | DPOGS214941  |
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Genomic Position | scaffold103:- 123365-125338 |
See gene structure | |
CDS Length | 1110 |
Paired RNAseq reads   | 1618 |
Single RNAseq reads   | 6267 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004822 (0.0) |
Best Drosophila hit   | eIF4AIII (0.0) |
Best Human hit | eukaryotic initiation factor 4A-III (0.0) |
Best NR hit (blastp)   | eukaryotic initiation factor 4A-III [Bombyx mori] (0.0) |
Best NR hit (blastx)   | eukaryotic initiation factor 4A-III [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0003743 translation initiation factor activity GO:0016281 eukaryotic translation initiation factor 4F complex GO:0006413 translational initiation GO:0004004 ATP-dependent RNA helicase activity GO:0005524 ATP binding GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome GO:0006974 response to DNA damage stimulus |
InterPro families    | IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR014014 RNA helicase, DEAD-box type, Q motif IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
Orthology group | MCL12494 |
Nucleotide sequence:
ATGGGCCTTCGAGATGAATTATTACGCGGCATTTATACTTACGGTTTCGAGAAACCTTCC
GCCATTCAGCAGAGAAGTATACTACCTATTGTGAAGGGCCGCGATGTTATAGCTCAGGCT
CAGTCCGGTACGGGCAAAACAGCTACATTTTCCATATCCATACTTCAGTCCTTGGATACA
ACTCTTCGTGAAACACAGGTCCTGATTTTGTCCCCTACTCGAGAATTGGCCACACAGATT
CAAAAGGTTATTCTGGCTCTGGGAGACTTTATGAATGTACAGTGCCATGCATGTATTGGT
GGTACTAATCTTGGGGAAGATATCAGAAAACTTGATTATGGGCAGCATGTTGTATCAGGA
ACACCCGGCAGAGTTTTCGATATGATCAGAAGGAGAGTGCTCCGTACAAGGTCTATTAAG
ATGCTAGTCCTCGATGAAGCTGACGAAATGTTGAATAAAGGATTCAAGGAACAAATTTAT
GATGTCTACCGTTATCTACCTCCGGCTACACAAGTTGTTCTTATATCCGCAACTCTACCC
CATGAGATTCTGGAAATGACATCAAAGTTTATGACCGATCCTATTAGGATTCTTGTAAAA
CGTGATGAGTTGACATTGGAAGGTATTAAACAGTTCTTTGTTGCCGTGGAAAGAGAGGAG
TGGAAATTTGATACTCTCTGTGACTTGTATGACACATTAACAATCACTCAGGCGGTGATC
TTCTGTAACACTAAAAGAAAGGTTGACTGGCTCACTCAGAAAATGCAGGAAGCCAACTTC
ACAGTGAGCTCCATGCATGGAGATATGCCTCAAAAGGAAAGAGACAATATCATGAAGGAG
TTCCGTTCAGGACAAAGCCGGGTGCTTATAACAACAGATGTATGGGCCAGGGGTATAGAT
GTACAGCAGGTGTCCCTAGTCATCAACTATGACTTGCCAAATAATCGTGAATTGTACATT
CATAGAATCGGCAGATCAGGTCGTTTCGGTCGTAAGGGTGTTGCGATTAACTTTGTGAAG
TCCGACGACATAAGGATCCTTAGAGACATAGAGCAGTACTACTCCACACAGATTGACGAG
ATGCCAATGAATGTTGCTGACTTAATATAA
Protein sequence:
MGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDT
TLRETQVLILSPTRELATQIQKVILALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSG
TPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP
HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI
FCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGID
VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDE
MPMNVADLI