| New model in OGS2.0 | DPOGS214944 |
|---|---|
| Genomic Position | scaffold103:- 74912-93682 |
| See gene structure | |
| CDS Length | 6510 |
| Paired RNAseq reads | 2057 |
| Single RNAseq reads | 9767 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004825 (0.0) |
| Best Drosophila hit | DNA polymerase epsilon (0.0) |
| Best Human hit | DNA polymerase epsilon catalytic subunit A (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to DNA polymerase epsilon CG6768-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to DNA polymerase epsilon CG6768-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0006261 DNA-dependent DNA replication GO:0003887 DNA-directed DNA polymerase activity GO:0008296 3'-5'-exodeoxyribonuclease activity GO:0008622 epsilon DNA polymerase complex GO:0000166 nucleotide binding GO:0008270 zinc ion binding GO:0003677 DNA binding GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR012337 Ribonuclease H-like IPR013697 DNA polymerase epsilon, catalytic subunit A, C-terminal IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain IPR006172 DNA-directed DNA polymerase, family B |
| Orthology group | MCL14148 |
Nucleotide sequence:
ATGGTTCTTCAAAATACTGGTAAATACAGGACAGACAAAAACGATTCAAATAAAAAAGAT
CCCGGGACATCTTCTGCACCCAGGGAAGAATCATCTGAATCACGACTGCGAAATGCCTTG
GATAACGATAAAATTGATTCTAAATATGGGTTCGATAGAGTCAGAGATACTAAGGAACGA
ACGGGTTACTTAATAAATATGCATACGGCTGAAATATTGGATGAAGACAAAAGACTCGTA
GCAGCTGTAGATTATTACTTCATTGAAATGGATGGATCTAGGTTTAAAGTGTCTCTGGTG
TTCCAGCCTTATTTTCTTGTTCTTGCTAGGAAGGAATGTGAACAAGAAGTTATACAATAC
TTATCTAAGAAGTTCGCTGGAACGATTCACAAGATAGAAGTAGTAGAAAAGGAAGATCTA
GATTTGCCTAATCATTTGTCAGGCATAAAACAGAGATACATTAAATTGTCGTTCATGTCG
CAAAACGAGATGATGAAAGTCAGAAAAGAATTATTAACAGCAGCAAACAAAAGCAAAGAA
AGGGAGAAAAAGGATGCGATTTACTCCGAAATGTTGACAAATGTATTGACAAATGCAGCT
GCTATCGAACATGCTAAGAAAACTACAGATCATTTGGAAAATATTATCGACATAAGAGAA
CATGATGTGCCGTACCACATAAGAGTGTCAATAGACATGAAGATATTCTGTGGAACCTGG
TACACTGTTAAAAGCAGGGGGAATGACACTCCAATATTTACTAAACGTGACGACATTCTT
GAGAGACCGGACCCTATTGTTCTGGCATTTGATATTGAGACAACAAAGTTACCGCTGAAG
TTCCCAGACTCACAGACGGATCAGATTATGATGATATCTTACATGATAGATGCTCAGGGA
TACTTGATTACCAACAGGGAAATTATATCCACTGATGTAGAGGATTTTGAATACACCCCT
AAACCCGAGTTTGAAGGGCAATTTATAGTCTTCAACGAGCCCAATGAACTTGCCTTAATT
CAAAAATTCTTTGATCACATAATGGATATTAAGCCACACATATTTGTCACTTACAATGGA
GACTTTTTCGACTGGCCGTTCGTGGAGGCCCGTGCGGCAGCACTAGGGCTGGATATGCGT
CAAGAGATTGGATTCAGTAGACTTACTAGGGATGGGACATACGCTTGCAGACCGGCCATG
CATATGGACTGTTTGTGCTGGGTGAAGAGAGATTCATACCTGCCAGTGGGTTCCCAAGGT
CTGAAGGCGGTCGCCAAGGCCAAGCTGAGATATGACCCAGTGGAATTGGACCCTGAAGAT
ATGTGCAGGATGGCCTCTGAACAACCACAGGTGTTGTCAAACTACTCGGTGTCAGATGCG
GTGGCCACATACTACTTGTATATGAAGTATGTACAACCTTTCATATTCGCCCTCTGCACC
ATCATACCACTGGAACCGGATGAGGTACTCCGTAAGGGCTCGGGCACACTGTGCGAGTCA
TTGCTCATGGTGGAAGCCTTCCACGCTAACATCGTGTTCCCCAATAAGCAAGTGGACGAA
CTCAACAAGCTGACAAGCGACGGACACGTCCTGGAAACGGAGACGTACGTTGGAGGGCAC
GTTGAGGCGCTGGAATCTGGCGTATTCCGCGCCGATATCAAATGCAAGTTCCGCATCGTA
CCATCGGCTGTGGAAAAACTGATAGAAAACATAGAGAAGACCATGAAACACGCGATAGAA
GTGGAGGAAGCTGTTCCCTTAGAGCTGGTTACCAACTTTGACGAAGTGTGCTCAGAGATA
AGAGAGAAATTGCAACATATGAAGGACCATCCCAGGAGGGACGAGAACCCACTGATATAT
CATTTGGATGTGGGAGCAATGTATCCCAATATTATTTTAACTAATAGACTACAACCGTCG
GCCATGGTGAGTGCCAGCGCGTGCGCCGCCTGCGACCACAACAGACCGGGGGCTCGCTGT
CAGAGACGCATGGACTGGACGTGGCGGGGGGACTACCTGCCGGCGACCAGGAGCGAGTAC
CAGCGGATACAGCAGCAACTGGAAACGGAGAAGTTCCCTCCCCTACATCCCGGGGGACCC
AATATATATGAATATACTCTTCACCTCCCTTATATTATAATGGACCGTCGCTATGAATAC
AAGGCGTTGAACAAGCAGGCCAAGGCGCTGGTGGCGGAGGCGGTCCGCGCCGGGGACGCC
GCGGACATCAAGAACGCGCGCTCCAGGGAAGTGCTGTACGACTCCCTGCAGCTCGCGCAC
AAGTGCATCCTCAACTCCTTCTATGGATACGTTATGAGGAGGGGAGCTCGCTGGCACAGT
ATGGAGATGGCGGGCATCGTGTGTCACACGGGCGCTAACATCATCATGAGGGCGAGGGAG
ATCATCGAGCAGGTGGGGCGGCCGCTGGAACTCGATACAGACGGTATCTGGTGCATACTA
CCCTCGTCGTTTCCAGAGAACGTCACTATCAATACCACTCATCACAAGAAGAAGAAAATT
AATGTCTCATATCCGAATGCCGTTCTGAACGCTATGGTTAAGGATTATTTCACCAACGAT
CAATATTACGAACTAGTGGATCCTGTGGAGAAGAAGTATGAAGTTCGCTCTGAGAATTCT
ATATTCTTTGAGGTTGATGGACCTTACTTGGCGATGGTGCTGCCAGCCTCCAAAGAAGAA
GGGAAGAAGCTCAAGAAGAGATACGCTGTGTTCAATTTCGATGGTTCCTTGGCTGAACTC
AAAGGTTTCGAGGTGAAGCGTCGCGGTGAGCTGCAGCTGATCAAGATCTTCCAGTCATCA
GTATTCGAGGCGTTCCTCAAAGGGAACGATCTGAAGTCGTGTTACGGCGCCGTAGCGAAG
GTTGCCGACTACTGGCTCGACGTGTTATACAGCAAGGGATCCAACATGCCGGACTCGGAA
CTGTTCGAGCTGATATCAGAAAACAGATCTATGTCCAAGAAGCTAGAAGACTACGGCGGG
CAGAAGTCTACGTCTATATCCACTGCCAAGAGATTAGCGGAGTTTCTCGGTGACGAGATG
GTGAAGGACGCGGGCCTGGCTTGCAGTTTCCGAGTTAACCGCAAATACACACACACACAC
ACACACACACGCACACACACACACACGCACACACACACACACACACACACACACACACAA
GCATATTATATTCTATGGTGCACATGCTCAGGTCTAGATACTGGATTCTTGTTTGTACTG
GAGCTGACTCGGGATGCCATTCGCCTATCTGAAACATATATAGGTCGTGTTAGTTACACT
GTCTATAAGTCAAGACCATCGCTCGACAACCCAGTCCCCCGAGTGCAGTATCCAGACTGG
CTTCACAAGAAAATACTGGCCAAGACAGACAAGTACAAGACGAGGAAAATCACAGAGATG
TTTACATCAAAGCCCAAAGAAATCAGGAACTGCGAGGACGCGGACGCCGCGTGTGAGAGT
ACAGAAGTGGATATCGAAGACATTGGTAAAGAGTGCACGGCCAAACCTATTCAACCCGTG
GCGCACCGCGTGAAGCGGAAACGAGAACCGTCCCCGAGGAGAGCGAGCTCGTGGAGGGAG
GCTCTGGGACCACCCCCCAGCTTCGGCGATACCAAGGAGCAGAGAACGGCGTGGATAGTG
TTCCAGAAGAAAAAATGGATGTGGCAGATGGAGCAACGTGGAGTCAGAGACAGAAATAAA
AGGGGCAAGGTCGACAGTGACGTTTCACTGATGTCGAAGAGCCTCGGCCCGGCCAATACT
CTGGGGGGATTCATTAAGAGAGCGCAGAGGACTCTGCTGAACACACCGTGGCAGGTTATA
CAGATCCAGGAGACGGCTGAGCCGGGAGTGTTCCGTGTGTGGTCGCTGGTAGGGTCGGAG
CTGCACCAGCTGAAGCTCACCGTCCCCAGACAGTTCTACGTGAACCGGCGCGTGCCGCTG
ACCTGCGACACGGGACCCCACTGGCGCCGCGTGTCCCGCGTGCTGCCCCGCTCCCGGCCG
GCGCACCATCTCTACTTATACACCGTCCCTGAAGCTCTATACAGGGAGCGATGCCAGGAG
CTGATGAGTGAGCTGTCGGCTCCAGAGATCGAGGGTATCTACGAGACACAGATGAGTCTG
GAGTTCCGAGCGCTCGTGACCATCGGATGTGTGTGTGTCGTAGACCCCCAGGAGGCACGG
AGATTGATACAGTTCGGCTCAAACAACATGGACTCGTTTAATCTGAGCCAGCTCCAATTC
AAGAGTGTGGCTCACCAGCCGTACCTACAGAAACAGGACGAGGTGTCTCCTATAAAGCAC
ATCTTCCTATATCAACACTCGTCTCCCAACTCGAGCCGCAGTATGTGGTCGCTGGTGCTG
GCTCCTATTAAGAAAGGCTATATTTTTGTCCTGGACACCGTCAAGACGAACCAAGTGCCG
AACATGAACACCCTGTATAACGCTGAGAGGACCGCTAAAATTAATCTAGGTACGGATGAG
AAGAGTCTGCCAAACGCGGATCTGTCGTGGGAGGTGGTTGTGGAGACCGAGCCTCGGGCT
GTGTACCGCGGGGTCCAGCGAGCGTTACAGAGGTACAGGGACGAGAGGTGCGGACCCACC
ATGGTGGCCCTTCAGACCACCCTATCATCACACGCGCTCCTGGCACTCATGCCCGGACTT
TCTGAATTCCCGCTTGTGCCACTGCACGTGAGAGACGTAGAGACTCTGTACAACACCTTG
GAGTGGCAGCGGATAGGAGCTAGAGCCATCGTCCGGCACTACCTCAACTTGGACTCCGTT
CTGGAACTCACTATAGAGCAGTGCAGGTACTTCCACCTCCCCCTCGGCAACACGTCGTCC
GACCCGACCCAGTTCGGTGCCGATGTGTTCTTCGCACGTCACCTCCTCAAACATAACTTC
GTGCTGTGGTGCTCCGGCTCCGAGCGACCAGACCTCGGCGGCCGGGAGATTGATGACAAT
AGGCTTGTGAGTGAGTCCGACGAGTGGTCTAGCTGCCGGGTGTGTTCCCGGGGATCCTAC
GGCGGGGTCTGCGTGGCTCTGACGGGAGACGCGCTGGCCGTGTCCGCTCTGCTGCAGGCG
CATACTATATTACAGACTGAAGGCACCAGCGTCGCCACGTCCTTCGGAGCGCAGCACGCC
AACATACAGGACGTGATGGCCTCCACAGGTTCAAACGCCACAGAGACGTATGACGAGACA
GCTCAATGCAGCGCAGCCTTCAAGATTCTGAGGACGATGGTGGCTTCATGGCTGCGTGAC
GTCACTCACTACAAAAACGTCTTCGCGGACTTCCAGATATCACACTTCTACAGATGGCTC
AAGTCGCCCACCTCTCTATTGTACGACCCGGCCCTGCGCCGCACCTTGTACAGCCTCATG
AAGAAGCTGTTCCTCATGCTGGTAGCGGAGTTCAGGAGACTCGGCTCGCAGATCATCTAC
GCCGACTTCAACAAGATCATTCTGTATACCAAGAAACACTCGCTCATGGACGGCATCGGA
TACGTGGAGTTTGTGGTTCAGAGTATCAGGAACAAGGAGCTGTTCCACGGCATTGACATC
CGGTACAAACAGTGCTGGACCTACCTGCTGTGGCTCGATGAAGCCAACTATGCGGGGATT
GAGGGCAAACTGCCAGCGGGTCTGGTGGAGGTGGGGTCGTCTCAGATACCAGATAACACG
GACGTGGAGGAGGAGGGTGAGATAACTATGGAGTGGAACATATCCCGGTTCATGCCGGGC
ATCACCCGCGAGTCGTTCGTGTCGTGCGTGGCGGGCTTCTTGTCCGCGGCACACGCCGAT
TCCGGGACACTCAAGGCGATGCTGGCCGGGGAAATGACGCAGAAATTTTTCCAGTTAGCA
GAGAAAATAAATCGTCGTATGCCAACTCTGAGCCTGGAAGATATCGGTCCCCAGGCTGGG
CTCCGCGAGGAGTCGCTAGAGGGCGCCACGCCCGCGCTGCTGTTCGTTAACGCGCTCTGT
CATGTACTGGGACTTGACACAAACTTGGAAGATGAGGTGACTCTCCTCCGTCGCAACCTC
TTACGGTTGCTGTCAGTGGGCGAGTTCAGTTCTTTAGCCGAGTGGCGGGACCCCTGCGCC
TCGTGTGTGTTGGCCGAACTCAGCTGCCGGGTCTGCAACCACTCTCAAGACCTGGACCTG
TGTCGCACGCAGCATCATGACAATGAACAGCCAGTGTGCTTGTGTCCAACTTGCGGCACA
GCATATGATAACCAGGAGTTGGAATGGAAACTCATTGAAACTATGAACAGGAGAGCTATG
AGTTATACCTTACAAGATCTTATATGCACCAGATGTCATCAGGTGAAGCGTGAGAATCTA
TCAACGGTGTGCGACTGTGCCGGTGAATTCACAACAATGGTATCCCTCAAGGAAATAAGA
ACGCAGCTCATGACCTACAAGACTATAGCCGAGTACTATAAAATGCCCTTACTAATGGAA
CTCATAGCGTATAATTTAAGTAACATGTAA
Protein sequence:
MVLQNTGKYRTDKNDSNKKDPGTSSAPREESSESRLRNALDNDKIDSKYGFDRVRDTKER
TGYLINMHTAEILDEDKRLVAAVDYYFIEMDGSRFKVSLVFQPYFLVLARKECEQEVIQY
LSKKFAGTIHKIEVVEKEDLDLPNHLSGIKQRYIKLSFMSQNEMMKVRKELLTAANKSKE
REKKDAIYSEMLTNVLTNAAAIEHAKKTTDHLENIIDIREHDVPYHIRVSIDMKIFCGTW
YTVKSRGNDTPIFTKRDDILERPDPIVLAFDIETTKLPLKFPDSQTDQIMMISYMIDAQG
YLITNREIISTDVEDFEYTPKPEFEGQFIVFNEPNELALIQKFFDHIMDIKPHIFVTYNG
DFFDWPFVEARAAALGLDMRQEIGFSRLTRDGTYACRPAMHMDCLCWVKRDSYLPVGSQG
LKAVAKAKLRYDPVELDPEDMCRMASEQPQVLSNYSVSDAVATYYLYMKYVQPFIFALCT
IIPLEPDEVLRKGSGTLCESLLMVEAFHANIVFPNKQVDELNKLTSDGHVLETETYVGGH
VEALESGVFRADIKCKFRIVPSAVEKLIENIEKTMKHAIEVEEAVPLELVTNFDEVCSEI
REKLQHMKDHPRRDENPLIYHLDVGAMYPNIILTNRLQPSAMVSASACAACDHNRPGARC
QRRMDWTWRGDYLPATRSEYQRIQQQLETEKFPPLHPGGPNIYEYTLHLPYIIMDRRYEY
KALNKQAKALVAEAVRAGDAADIKNARSREVLYDSLQLAHKCILNSFYGYVMRRGARWHS
MEMAGIVCHTGANIIMRAREIIEQVGRPLELDTDGIWCILPSSFPENVTINTTHHKKKKI
NVSYPNAVLNAMVKDYFTNDQYYELVDPVEKKYEVRSENSIFFEVDGPYLAMVLPASKEE
GKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNDLKSCYGAVAK
VADYWLDVLYSKGSNMPDSELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDEM
VKDAGLACSFRVNRKYTHTHTHTRTHTHTHTHTHTHTHTQAYYILWCTCSGLDTGFLFVL
ELTRDAIRLSETYIGRVSYTVYKSRPSLDNPVPRVQYPDWLHKKILAKTDKYKTRKITEM
FTSKPKEIRNCEDADAACESTEVDIEDIGKECTAKPIQPVAHRVKRKREPSPRRASSWRE
ALGPPPSFGDTKEQRTAWIVFQKKKWMWQMEQRGVRDRNKRGKVDSDVSLMSKSLGPANT
LGGFIKRAQRTLLNTPWQVIQIQETAEPGVFRVWSLVGSELHQLKLTVPRQFYVNRRVPL
TCDTGPHWRRVSRVLPRSRPAHHLYLYTVPEALYRERCQELMSELSAPEIEGIYETQMSL
EFRALVTIGCVCVVDPQEARRLIQFGSNNMDSFNLSQLQFKSVAHQPYLQKQDEVSPIKH
IFLYQHSSPNSSRSMWSLVLAPIKKGYIFVLDTVKTNQVPNMNTLYNAERTAKINLGTDE
KSLPNADLSWEVVVETEPRAVYRGVQRALQRYRDERCGPTMVALQTTLSSHALLALMPGL
SEFPLVPLHVRDVETLYNTLEWQRIGARAIVRHYLNLDSVLELTIEQCRYFHLPLGNTSS
DPTQFGADVFFARHLLKHNFVLWCSGSERPDLGGREIDDNRLVSESDEWSSCRVCSRGSY
GGVCVALTGDALAVSALLQAHTILQTEGTSVATSFGAQHANIQDVMASTGSNATETYDET
AQCSAAFKILRTMVASWLRDVTHYKNVFADFQISHFYRWLKSPTSLLYDPALRRTLYSLM
KKLFLMLVAEFRRLGSQIIYADFNKIILYTKKHSLMDGIGYVEFVVQSIRNKELFHGIDI
RYKQCWTYLLWLDEANYAGIEGKLPAGLVEVGSSQIPDNTDVEEEGEITMEWNISRFMPG
ITRESFVSCVAGFLSAAHADSGTLKAMLAGEMTQKFFQLAEKINRRMPTLSLEDIGPQAG
LREESLEGATPALLFVNALCHVLGLDTNLEDEVTLLRRNLLRLLSVGEFSSLAEWRDPCA
SCVLAELSCRVCNHSQDLDLCRTQHHDNEQPVCLCPTCGTAYDNQELEWKLIETMNRRAM
SYTLQDLICTRCHQVKRENLSTVCDCAGEFTTMVSLKEIRTQLMTYKTIAEYYKMPLLME
LIAYNLSNM