| New model in OGS2.0 | DPOGS214946 |
|---|---|
| Genomic Position | scaffold103:- 65016-66388 |
| See gene structure | |
| CDS Length | 522 |
| Paired RNAseq reads | 214 |
| Single RNAseq reads | 758 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | Rpb7 (6e-84) |
| Best Human hit | DNA-directed RNA polymerase II subunit RPB7 (2e-78) |
| Best NR hit (blastp) | mixed-lineage leukemia protein, mll, putative [Pediculus humanus corporis] (1e-88) |
| Best NR hit (blastx) | RNA polymerase II subunit 7 [Nasonia vitripennis] (5e-89) |
| GeneOntology terms | GO:0006366 transcription from RNA polymerase II promoter GO:0005665 DNA-directed RNA polymerase II, core complex GO:0003899 DNA-directed RNA polymerase activity GO:0003723 RNA binding |
| InterPro families | IPR005576 RNA polymerase Rpb7, N-terminal IPR012340 Nucleic acid-binding, OB-fold IPR016027 Nucleic acid-binding, OB-fold-like IPR003029 Ribosomal protein S1, RNA-binding domain |
| Orthology group | MCL15136 |
Nucleotide sequence:
ATGTTCTACCACATATCGTTGGAGCATGAAATACTGCTGCATCCAAGATATTTTGGACCG
CAATTATTAGATACTGTTAAACAGAAGTTGTATACAGAGGTGGAAGGAACTTGCACTGGC
AAATATGGTTTTGTTATAGCAGTGACCACAATAGACAGCATTGGTGCAGGTCTCATCCAA
CCAGGACAAGGATTCGTTGTGTATCCAGTTAAATATAAAGCCATAGTTTTCAGACCATTT
AAAGGAGAGGTTCTTGACGCTATAGTCACACAAGTGAATAAGGTTGGAATGTTTGCTCAA
ATCGGTCCGTTAAGTTGTTTTATATCACATCATTCCATACCCACTGATATGGAATTCTGT
CCCAATGTAAATCCCCCGTGCTATAAAAGTAAACAGGAAGATAATGTCATACAGGAAGAG
GATGTCATTAGATTAAAGATTGTTGGCACCAGAGTTGATGCCACGGGCATTTTTGCCATC
GGAACACTAATGGACGACTACTTAGGATTAGTAACACAATGA
Protein sequence:
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVIAVTTIDSIGAGLIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAQIGPLSCFISHHSIPTDMEFC
PNVNPPCYKSKQEDNVIQEEDVIRLKIVGTRVDATGIFAIGTLMDDYLGLVTQ