| New model in OGS2.0 | DPOGS214947 |
|---|---|
| Genomic Position | scaffold103:- 9845-15916 |
| See gene structure | |
| CDS Length | 537 |
| Paired RNAseq reads | 148 |
| Single RNAseq reads | 695 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004828 (7e-52) |
| Best Drosophila hit | CG12207, isoform A (1e-17) |
| Best Human hit | lysM and putative peptidoglycan-binding domain-containing protein 2 isoform 1 (9e-15) |
| Best NR hit (blastp) | PREDICTED: similar to CG12207-PB, isoform B [Apis mellifera] (2e-25) |
| Best NR hit (blastx) | PREDICTED: similar to CG12207-PB, isoform B [Apis mellifera] (2e-24) |
| GeneOntology terms | GO:0016998 cell wall macromolecule catabolic process |
| InterPro families | IPR018392 Peptidoglycan-binding lysin domain IPR002482 Peptidoglycan-binding Lysin subgroup |
| Orthology group | MCL16144 |
Nucleotide sequence:
ATGTCCAAGGGAGATACTTTGCAAGGAATAGCTCTAAAATATGGTGTTACAATGGAGAAG
ATTAGACGAGTGAATCGCCTGTTTGCAACGGACAGTTTATTTTTGAGAGAATATTTGTTA
ATACCTGTAACCAAGGAGTCTCCTTATTACGAGAACGGAGAACGAGTGACGGAGATAGCG
CTGCCGAGCCATCGCGCGTCGATAGCTGGTATGCCAACCAGGGACTTCTCTCCTGGAAGT
CCTGACGAGAAGGAGTCCTTTGATAATTTCCTCAATAGGCTGGACTCATCAATTGCGAAT
ATCAAAAAGCACGTAGAGAAAAGCAAGGAGACCAGCGAATTTGTAAAGGACCTCGATGAT
GGCTACGTTCGTCACAGGCCGACGGCTAGGTTACGTCAGTCGGCGTCCATGGGGGCTTCG
ACTTCCTATAACGAGGTGATCCCGCCTCCCCTGCCACCACCGTTAACCCAGGGCAGGCGT
GTAGACAACTCGCTGAGGAGGCTAGAACGTGCCCACGACGACCTGTTCCAATTGTAG
Protein sequence:
MSKGDTLQGIALKYGVTMEKIRRVNRLFATDSLFLREYLLIPVTKESPYYENGERVTEIA
LPSHRASIAGMPTRDFSPGSPDEKESFDNFLNRLDSSIANIKKHVEKSKETSEFVKDLDD
GYVRHRPTARLRQSASMGASTSYNEVIPPPLPPPLTQGRRVDNSLRRLERAHDDLFQL