| New model in OGS2.0 | DPOGS214950 |
|---|---|
| Genomic Position | scaffold103:+ 71780-72805 |
| See gene structure | |
| CDS Length | 942 |
| Paired RNAseq reads | 827 |
| Single RNAseq reads | 2294 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004847 (8e-163) |
| Best Drosophila hit | sec13 (7e-107) |
| Best Human hit | protein SEC13 homolog isoform 1 (4e-109) |
| Best NR hit (blastp) | protein transport protein sec13, putative [Pediculus humanus corporis] (5e-135) |
| Best NR hit (blastx) | protein transport protein sec13, putative [Pediculus humanus corporis] (5e-141) |
| GeneOntology terms | GO:0015031 protein transport GO:0006810 transport GO:0006888 ER to Golgi vesicle-mediated transport |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat |
| Orthology group | MCL14976 |
Nucleotide sequence:
ATGATTAGTGTTTTAAATACTATTGACACTGGCCATGAAGACATGATACACGATGCAGAG
TTGGATTACTATGGACTAAGATTAGCGACATGTTCTTCGGATAACTCTGTTAAAATTTAC
GACATCAAAAGCGGTACACAAACTCTTGCCGCAGACTTAAAAGGACACTTTGGACCGGTG
TGGCAGGTTGCTTGGGCCCATCCAAAGTTTGGTAATCTACTGGCTTCTTGTTCATACGAC
AGAAAAGTGATCATATGGAAAGAATCCGGAGAATGGACCAAGCTTTACGAGTACTCTGGT
CATGAAAGTTCTGTGAATTCAGTGGCATGGGCGCCGGAAGAATACGGATTGATACTGGCA
TGTTGTAGTTCAGATGGCTCAATTTCTACCATCACTTACAATCAAGATGGAGGAAATTGG
GATGTTAAAAAGATACCTGGTGCCCATGCCATTGGAGTTAATTCTATCAGTTGGTGTCCA
GCAATATCTGCCGATCTTCATTTAGATCCCCTTACCAACAAAGATGCACCTAAAAGGATA
GTATCTGGAGGATGTGATAACTTAATTAAGATTTGGAAGGAGCAAGGAGATCAGTGGATT
GAAGAGAACCGTTTGGAAATGCACATGGATTGGGTGCGGGATGTTGCCTGGGCCCCATCT
CTTGGCTTGCAACGTTCTATGATTGCCAGTTGCTCTCAGGATAAAAGAGTTGTAATATGG
TCCAGTGATGATAATGTGTCTTGGAGTCCAACTATCCTCAATACATTTGACGATGTCATC
TGGAGTGTCAGTTGGTCTTTAACAGGAAACATACTAGCGGTATCCGGAGGAGACAATAAA
GTCAGCCTTTGGAGAGAAAATGCCGATGGACAGTGGTTATGTATAAGTGAAGTAGCGAAA
GGCCTGGGTCAGGCACCCAATGAAGAGAGGAGCACACTTTGA
Protein sequence:
MISVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPV
WQVAWAHPKFGNLLASCSYDRKVIIWKESGEWTKLYEYSGHESSVNSVAWAPEEYGLILA
CCSSDGSISTITYNQDGGNWDVKKIPGAHAIGVNSISWCPAISADLHLDPLTNKDAPKRI
VSGGCDNLIKIWKEQGDQWIEENRLEMHMDWVRDVAWAPSLGLQRSMIASCSQDKRVVIW
SSDDNVSWSPTILNTFDDVIWSVSWSLTGNILAVSGGDNKVSLWRENADGQWLCISEVAK
GLGQAPNEERSTL