| New model in OGS2.0 | DPOGS210418 |
|---|---|
| Genomic Position | scaffold345:- 48436-56692 |
| See gene structure | |
| CDS Length | 2070 |
| Paired RNAseq reads | 2064 |
| Single RNAseq reads | 5011 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | caspar, isoform A (1e-68) |
| Best Human hit | FAS-associated factor 1 (3e-64) |
| Best NR hit (blastp) | Fas (TNFRSF6) associated factor 1 [Tribolium castaneum] (9e-158) |
| Best NR hit (blastx) | Fas (TNFRSF6) associated factor 1 [Tribolium castaneum] (2e-119) |
| GeneOntology terms | GO:0050829 defense response to Gram-negative bacterium |
| InterPro families | IPR009060 UBA-like IPR006577 UAS IPR001012 UBX |
| Orthology group | MCL13007 |
Nucleotide sequence:
ATGGCTGAGAATAGAGAAGAAATTCTTGCGAATTTTCAAGGAATAACAAATATTGAAGAT
GTTGCTGAAGCAATATTCCATTTAGAAGAAGCAAATTGGGATTTACTTTCTGCCATAAAC
CGAGTGATGCCTCAAGATGGAAGCAGCTCAGCATCCCATTCCAATGACACTCACGATGTG
GAGATGATAGATGACGACATATCTGTGATAACTCCAAAAACTCACCCACCCGATCGGGAA
GACAGTCAAGCCTCAACATCATCCCCTAGAAATAATTCCCTCAACCTAGTAGAGTTACAA
GTACATTGTAATAATAAGATACACGAGATCAAAATATCAGGTTCAGCGACAGTCAATGAT
CTCAAGAAGCGTTTGGAACTGGTATGTGGAATTCCAGTTTGCAGACAGCAAATATCTGGT
CTAGGTGGTTCCAGAGCGACCTCCACTGCTGCATTGTCGACACTCGGTCTAACAAGGAAT
GCTGTTCTACGGCTGAAGGCTGCCGATACTGTCATGGCTGATGATGAGGTAGCGGAAAGA
TTGACAACGACCTACGTACTCCGAGTTAAGCATGACGAGAGGGAATACACACTCAAATAT
CCTGGAACGAAAACTGTACAAGAAGTCAAAAACGACCTCTACTCACTCACAGATATACCC
GTCAGATATCAAGTATGGACGGGCTGGCCGACTGTGTCAGGTCTGGATGACACGGTGTTA
GCTATGGTCGGTCTAGATCTACCACAGCATGAGCTCACAGTCAAAAGAGCACCCAGATTC
AAGGAGTACAAAAGAATTATAGTTGAAAGTTCAGATAGTGAGAACAGTTCGGTTGAAGAA
GTAGAAGACGGTGACAATTTCCCAACGGAGGATGATATGTTTGTCGATGTAACCTCGGAA
AGACTGCAGCCATTGATGTCGGATAACATTGAAGATGAAGCCCTCGGCTGTATAGAGTTC
TCACAACGGTTCCGAGCCCGCTACGGTCCTAACACACCTAATTTCTTCGAGGGTACCCTA
CATGATGCAATCAAAGAATCCTGTCTCAAACCAGCCAATGAGCGTAAGCTGTTAGGTGTG
TACCTGCATCACGAGCAGTCTGTGTTGTCTAACGTGTTCTGTGCACAGCTTCTGGGATGT
GAAACTGTGCTGCAAACCCTCGCAGCTAACTTTGTGCTATACGGCTGGGATCTCACACAT
CCACATAATAATAATATGTTGTTGTCATCTATAGCCAGTTCCCTGGGTCCTGTCGCCAGT
ATGACTGTCCGCAGCATCCCAGTGGAGCGTCTCCCCGCCTTGCTCGTCATCATGAGAGTG
AGATCCAACACCGAAATATACTCCGTCATTAATGGTAACGTGGGCGTGTCTGAGCTGGTT
GGTGGTTTAGTGGAAGCGCTTGAGAGGTTCGCCGTGCAAAGGGCGGAGGACGCGAGGGTC
GAGAGGGAGCGGGACGCGCGGCAGAAGGTCAAGAGAGAGCAGGACGAGGCCTACCAGCGG
AGTCTAGAGGCGGATAGAGCGAAAGAAGAAATAAAAAAACAGCAGGAACTAGAAAGAAAT
CAAGAATTAGAGAGAGCGGAGTTAGAAAGACTTATGGAGGAGGCCAAAAAAGAGGAGCAG
CGTGCCGGTGCCGCAGCCCGAGTGCCGTGTGAACCTGCGGCGGGTGCTGCGGACGTGGCC
CGCGTGCGAGTGAGACTGCCGCCGCCCCACCACGAGTGTCTCGAGCGACGCTTCAACGCC
ACTGACACGCTCGCGGCGTTGTTAGACTTCCTCGCCTCAAAGGGTTACCCACAGGAGAAC
TACAAAGTAATAGCTAGCTGGCCTAGAAGAGACCTGACGATGGAATCTCACAGCAGCACA
TTGAAAGCGTTAAAGCTGTATCCGCAGGAGACGGTTATGTTGGAGGAGCGTATCGCCACG
GATAGAGCTATACCGAAAGCAAGAAGTACTAAAGCCATAGAAAATTCTCTTATATTAACA
GAAAATATGCTGGCATCTGGAGTGCGAACACAAGGAGGCTTCGGTTCGTCCCAGACTGAT
TTTAGTCTATGCATTAAACCAGCTTCATAG
Protein sequence:
MAENREEILANFQGITNIEDVAEAIFHLEEANWDLLSAINRVMPQDGSSSASHSNDTHDV
EMIDDDISVITPKTHPPDREDSQASTSSPRNNSLNLVELQVHCNNKIHEIKISGSATVND
LKKRLELVCGIPVCRQQISGLGGSRATSTAALSTLGLTRNAVLRLKAADTVMADDEVAER
LTTTYVLRVKHDEREYTLKYPGTKTVQEVKNDLYSLTDIPVRYQVWTGWPTVSGLDDTVL
AMVGLDLPQHELTVKRAPRFKEYKRIIVESSDSENSSVEEVEDGDNFPTEDDMFVDVTSE
RLQPLMSDNIEDEALGCIEFSQRFRARYGPNTPNFFEGTLHDAIKESCLKPANERKLLGV
YLHHEQSVLSNVFCAQLLGCETVLQTLAANFVLYGWDLTHPHNNNMLLSSIASSLGPVAS
MTVRSIPVERLPALLVIMRVRSNTEIYSVINGNVGVSELVGGLVEALERFAVQRAEDARV
ERERDARQKVKREQDEAYQRSLEADRAKEEIKKQQELERNQELERAELERLMEEAKKEEQ
RAGAAARVPCEPAAGAADVARVRVRLPPPHHECLERRFNATDTLAALLDFLASKGYPQEN
YKVIASWPRRDLTMESHSSTLKALKLYPQETVMLEERIATDRAIPKARSTKAIENSLILT
ENMLASGVRTQGGFGSSQTDFSLCIKPAS