New model in OGS2.0 | DPOGS210478  |
---|---|
Genomic Position | scaffold345:+ 40545-41768 |
See gene structure | |
CDS Length | 1224 |
Paired RNAseq reads   | 458 |
Single RNAseq reads   | 1099 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002769 (4e-166) |
Best Drosophila hit   | CG2061, isoform B (4e-84) |
Best Human hit | lanC-like protein 3 isoform 2 (4e-86) |
Best NR hit (blastp)   | PREDICTED: similar to Lancl1 protein [Tribolium castaneum] (5e-114) |
Best NR hit (blastx)   | PREDICTED: similar to Lancl1 protein [Tribolium castaneum] (5e-114) |
GeneOntology terms   | GO:0003824 catalytic activity |
InterPro families    | IPR008928 Six-hairpin glycosidase-like IPR007822 Lanthionine synthetase C-like IPR020464 LanC-like protein, eukaryotic |
Orthology group | MCL10256 |
Nucleotide sequence:
ATGGTGCGATATTTTCCTAATCCTTACGACGACTATAAGTCGGGAATTAATTTGAATATT
GATAAGGACGAGGTGTTGTCCCAGATAAATGAACATATTAAGAATATTACCAAGCGCATT
CAGCCAAACCGAAAAAATGTTGAAGGTGGCTTATATGTCGGCATCACGGGCATATCGTAT
ATGTTTTATTACTTATCTCGAAATCCCTTACTTTCGGAGATGAAGTCTGAGTATATTGCA
AAAGGACTCGACTATCTTGCGCCGGCATTAGAGACGTCAGCCGGCGATAAAACCTCATAC
CTTCTTGGCGACGCCGGCACCTTCGCACTGGCGACTGTTTTAAAAAAAGAAATGGGGGAT
GAGGAGTTCACCCATAGCTTAAAAACATATAAATCTTTGTACAATTATTATTTAAACCCA
AAGTTTTTAAAGTGCGGAGGGGACGAGTTTTTTGTTGGTCGTGCCGGTTATCTTGCCGGA
GCTTTGTGGATAAGCCGTGAATTGAAAACTGAAATATTCACTCCGGAGGAATTGTATAAA
ATTTGCGACATAATTGTTGCATCTGGCCGACAATTTGCATCGGCACACAATAGTCCTTCT
CCATTAATGTATCATTATTACAATACTAAATATTTGGGAGCAGCTCATGGTAGCAGTTTC
ATTCTGCAAATGCTCTTATCTGTACCTGGTTATTTGGAATACAATAAATCTGCAGCCCAG
GACATAAAGAGCACAGTTGAGTTCATAGCATCTTTACAAACTGAGGAAGGCAATTGGCCA
TGTTGCATGGAGGAGGTTGGTTTATCTGATCATAAGTTAGTCCACTGGTGTCATGGAGCT
CCTGGGACTGTTTATTTGATGGCCAAAGCATACCTGGTGTTCAAAGACCAGAAGTATTAC
AATGCCTGTGTAAGGGCTGCAGAACTTGTATGGTCTAAAGGTCTCCTCCGTAAAGGTCCC
GGTTTATGCCACGGTGTGGCCGGTAATGGTTATGTTTTCTTGCTTCTTCACAGATTATCA
GGTGATGAGAAATATCTTTATAGAGCTAAGCTGTTTGCTGATTTTATGAATACTGAGGAC
TTCTTGCGGGATGCCCGACTGCCTGATAATCCAGAGAGTTTATATGAGGGTACGGCAGGA
ACAGTCTGCTTTTTATCGGACCTCCTTGTTCCAGACAAGGCAGAGTTCCCTTTCCAGGAT
GTATTCTCTACTTATGTTTATTAA
Protein sequence:
MVRYFPNPYDDYKSGINLNIDKDEVLSQINEHIKNITKRIQPNRKNVEGGLYVGITGISY
MFYYLSRNPLLSEMKSEYIAKGLDYLAPALETSAGDKTSYLLGDAGTFALATVLKKEMGD
EEFTHSLKTYKSLYNYYLNPKFLKCGGDEFFVGRAGYLAGALWISRELKTEIFTPEELYK
ICDIIVASGRQFASAHNSPSPLMYHYYNTKYLGAAHGSSFILQMLLSVPGYLEYNKSAAQ
DIKSTVEFIASLQTEEGNWPCCMEEVGLSDHKLVHWCHGAPGTVYLMAKAYLVFKDQKYY
NACVRAAELVWSKGLLRKGPGLCHGVAGNGYVFLLLHRLSGDEKYLYRAKLFADFMNTED
FLRDARLPDNPESLYEGTAGTVCFLSDLLVPDKAEFPFQDVFSTYVY