| New model in OGS2.0 | DPOGS210481 |
|---|---|
| Genomic Position | scaffold345:+ 58924-73962 |
| See gene structure | |
| CDS Length | 3390 |
| Paired RNAseq reads | 2470 |
| Single RNAseq reads | 5716 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001836 (8e-13) |
| Best Drosophila hit | thrombospondin, isoform F (8e-179) |
| Best Human hit | thrombospondin-3 precursor (8e-162) |
| Best NR hit (blastp) | AGAP002157-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | AGAP002157-PA [Anopheles gambiae str. PEST] (0.0) |
| GeneOntology terms | GO:0031012 extracellular matrix GO:0008201 heparin binding GO:0043234 protein complex GO:0005509 calcium ion binding GO:0033627 cell adhesion mediated by integrin GO:0005927 muscle tendon junction GO:0007517 muscle organ development GO:0016203 muscle attachment |
| InterPro families | IPR008985 Concanavalin A-like lectin/glucanase IPR013320 Concanavalin A-like lectin/glucanase, subgroup IPR001881 EGF-like calcium-binding IPR006210 Epidermal growth factor-like IPR013032 EGF-like region, conserved site IPR018097 EGF-like calcium-binding, conserved site IPR008859 Thrombospondin, C-terminal IPR013091 EGF calcium-binding IPR003367 Thrombospondin, type 3-like repeat IPR017897 Thrombospondin, type 3 repeat |
| Orthology group | MCL10371 |
Nucleotide sequence:
ATGGCTTCGCATGCCGTGTGGGGTGCATTAGTGCTTCTATTCGTCGCATCCTCTACATTT
TCACTTACACTAGACGAAGAAGCAACAAATGACGTCATAGCCGCCGCTTCAGCCACCGAA
GATGGTGAAGTAGCTATTATAGTCCGAGGTCCGTACGGGGATAACTTAGTCCGTGAGGAA
TTGCTTCACGCGAAGAGCACAGACGATAACTCCGTCTCACTTTATTACAATAGTAAAAGT
AAAAAGGTGTCATTGGAAAGTCTGAACGGGAATCACATCAAGTCAGTTTCCTGGAGTTTG
GGTTCTCATTTTCATGGCACATTGATTCTTATCGTGACCCACTCCAGAATAAAGTTGGCG
GTGGGATGCAAGCCGCTTCATTGGCATCCAATGTCCGGTAGGCATGACGTGCTAACACTT
CTAGCGAACGAAAAGTTAAAATTGTACCACGAAGAGAATGCTCCGGTGGAGGTGTATGAC
AGCGAAAAGACAGCGTTAGACGCCTTGAACTGCAACCACAGGGACCTTAAACCTCCGACC
TTATTGACAGTGGACTCTGATGTGGAGGAAGTCAAAGATTTTATAAAACGCGAAGAGAGA
ATGAAGATGGAAGATGAGATGCAAGGGGACGATCCGCGTAATAACTATATAGATCCTAAC
ATTTACGCCCCACTGCCTCTGCCACCAACGACACCTGGCTCACAAAGAGGAGACATTCCT
GCGACGGATATAGAATCTTGTGATGATGAAGTGATCCGTCAACTGAAACTTCTCCGTCAG
ACGATTGAACTTCTGCGTCGTGAGCTTGCAGACCAAAAAGGAACTATAGACGGACTCAGA
AACCAACTCCGAGCTTGTTGCAACCGAGTCTCGCCACCTCCCATAGATAGATGTTCCGGA
TCTTCGTGCTATCCTGGCGTGCAGTGTCGCAACACGGCGACAGGCATCCAGTGCGGACCC
TGTCCATCAGGGATGGAAGGTGATGGAAGAACATGCAGACCTATAACTTGCAATCGACGC
CCATGCTCTAAAAACGAATATTGCATCGACACGGAACAAGGGTTTAGATGCGAGCGGTGT
CCAGGAAGACAGACCAGCGACGGACAAACATGTCAATCAGCTTGTAGCTCCAATCCTTGC
TTTGGAGGAAGAGTTCAATGTCAAGATTTACCGGATGGTAGGTATCGTTGTGGGTCTTGC
CCCGCCGGTTATACAGGGAATGGGGAGCAGTGTGTTAGACTGTCTTGCCGTTCCAACACT
TGCTTCCAAGGAGTTGAATGCCAGGAGACGGCGTCAGGTCCACGGTGTGGACCGTGTCCC
CGGGGATACGACGGTGATGGTGTTCGTTGTGCACACGTTTGCTCGCGTCGACCCTGCGGG
GAGAGACGCTGCAGCCCCTCGAACAGCAGTCCCTACTACATCTGCGAAGGTTGCCCCAAG
GGCTACGAATGGAACGGTTACACATGCGTTGATATGGACGAGTGTGATTTAATACGTCCG
TGTGACGAACTGGTGTCGTGTCGTAATACGGAGGGAGGGTTCGAGTGTGGCGCATGTCCG
ACAGGGTACAGGGGCAGTTCGGGATGGAGCGGTGCTGGCCAGGAGAGACGGAAGGAGGGA
TGCGTTGATGTAGACGAGTGTGACCAAGACGTCTGTCCTCGGGGACGGCTGTGTGTCAAC
ACACCTGGTTCGTTCACGTGCGTTCCCTGCGGCGGCCACTACTACGTGAACACGTCTCGG
CCGTGCATAGAGGCGGACTCCTTGCGGCGCTGCGACCCAGCCTTCTGCCGCTCTCATAAC
GCCGTGTGTGGCTTCGGACAGGGCTGTGTGTGTGCGACGGGCTGGGCCGGTAATGGTACT
GTTTGCGGTACGGACAGTGATCTAGACGGATATCCGGATCAACAGTTGCCTTGTACTGAA
TTGCAATGCACAGCTGATAACTGTCCCCATGTGTCCAACTCGGGACAGGAGGACGCAGAT
AAGGACGGTATCGGAGATTCTTGCGATCCTGATGCTGATGGTGACGGCATACCGAATGTC
CCGGACAATTGTCCCTTAACACCTAATCCAGATCAGCTAGATAGGGACGAGGATCGCAGT
GACAAACGTGGGGATGCTTGTGACAATTGTCCAAGAAGATTTAACCCTGGACAAGAAGAT
GCAGATAACGATGGACTCGGAAACGTCTGCGATCCCGACATGGATAATGATGGCATTCCC
AACGACCACGACAATTGTCCTCTCGTGTTCAACCCACAACAGGAAGATATGGATGGAGAT
GGTGTGGGTGATCTGTGCGACAACTGTCCAAGAGTACGGAACCCCTCCCAGGATGACTCC
GACAAAGATAACGTTGGTGACGCCTGTGACAGTGACGTGGATAGAGACCAGGACGGCATA
CAGGACGGTTTGGATAATTGTCCGAATTTAGCGAACAGTGATCAGCAAGATGTTGATAAT
GATGGCAAGGGAGACGCTTGTGATGATGATATAGACGGTGATGGGATCCCGAACCTCGAA
GACAACTGTCCTTTGGTGTACAATCCTGATCAGGCTGACGCTAATGGTGACGGTGTCGGG
AACGTTTGCGACAACGACTTCGATGGAGACAACATCACTAACGCACTCGACAATTGCCCG
AATAATTCGAGGATTTTTCGCACCGACTTCAGGAAGTATATGACGGTAAGGTTGGACCCA
GAAGGTACCTCCCAGCAAGACCCACGCTGGCAGCTCGCACACGAGGGCGCTGAGATCACT
CAAACCCTCAACTCAGATCCTGGACTGGCGGTCGGATTCGACAGCTTCGGAGGAGTTGAC
TTTGAAGGCACCTTATTTGTCGACTCGCACATAGACGATGACTACGTCGGCTTCATATTC
GGCTACCAGAACAACAAGCGGTTTTATGTGGTGATGTGGAAGAAGAACAGCCAGACGTAT
TGGCAGACGACGCCGTTCAGGGCGGTCGCGGAGCCGGGGATACAGCTGAAGTTGGTGCAC
TCTAGCACTGGACCTGGGAAGATACTGAGGAACGCGCTCTGGAACACGGAGTCTACTCCT
GATCAGGTGACACTTCTGTGGAAGGATCCTCGAAACGTCGGCTGGCGAGAGAAGACCGCG
TACCGCTGGCGTCTCATACACAGACCCAAGATAGGACTGATTAGACTGAAGATATATGAG
AACAACAGTCTCGTGGCTGACTCCGGGAACGTTTACGACTTCACGCTTAAGGGTGGAAGG
CTGGGAGTTTTCTGCTTTTCCCAGGAAATGATCATTTGGTCCAACCTTGTGTACCGCTGT
AACGATAAAATACCAACGAACATAGTATCAGAACTGCCACCAAGGCTCCTTAAAAAGTTG
GATATAGACCACGACTTCGTTTATTTGTAG
Protein sequence:
MASHAVWGALVLLFVASSTFSLTLDEEATNDVIAAASATEDGEVAIIVRGPYGDNLVREE
LLHAKSTDDNSVSLYYNSKSKKVSLESLNGNHIKSVSWSLGSHFHGTLILIVTHSRIKLA
VGCKPLHWHPMSGRHDVLTLLANEKLKLYHEENAPVEVYDSEKTALDALNCNHRDLKPPT
LLTVDSDVEEVKDFIKREERMKMEDEMQGDDPRNNYIDPNIYAPLPLPPTTPGSQRGDIP
ATDIESCDDEVIRQLKLLRQTIELLRRELADQKGTIDGLRNQLRACCNRVSPPPIDRCSG
SSCYPGVQCRNTATGIQCGPCPSGMEGDGRTCRPITCNRRPCSKNEYCIDTEQGFRCERC
PGRQTSDGQTCQSACSSNPCFGGRVQCQDLPDGRYRCGSCPAGYTGNGEQCVRLSCRSNT
CFQGVECQETASGPRCGPCPRGYDGDGVRCAHVCSRRPCGERRCSPSNSSPYYICEGCPK
GYEWNGYTCVDMDECDLIRPCDELVSCRNTEGGFECGACPTGYRGSSGWSGAGQERRKEG
CVDVDECDQDVCPRGRLCVNTPGSFTCVPCGGHYYVNTSRPCIEADSLRRCDPAFCRSHN
AVCGFGQGCVCATGWAGNGTVCGTDSDLDGYPDQQLPCTELQCTADNCPHVSNSGQEDAD
KDGIGDSCDPDADGDGIPNVPDNCPLTPNPDQLDRDEDRSDKRGDACDNCPRRFNPGQED
ADNDGLGNVCDPDMDNDGIPNDHDNCPLVFNPQQEDMDGDGVGDLCDNCPRVRNPSQDDS
DKDNVGDACDSDVDRDQDGIQDGLDNCPNLANSDQQDVDNDGKGDACDDDIDGDGIPNLE
DNCPLVYNPDQADANGDGVGNVCDNDFDGDNITNALDNCPNNSRIFRTDFRKYMTVRLDP
EGTSQQDPRWQLAHEGAEITQTLNSDPGLAVGFDSFGGVDFEGTLFVDSHIDDDYVGFIF
GYQNNKRFYVVMWKKNSQTYWQTTPFRAVAEPGIQLKLVHSSTGPGKILRNALWNTESTP
DQVTLLWKDPRNVGWREKTAYRWRLIHRPKIGLIRLKIYENNSLVADSGNVYDFTLKGGR
LGVFCFSQEMIIWSNLVYRCNDKIPTNIVSELPPRLLKKLDIDHDFVYL