| New model in OGS2.0 | DPOGS212184 |
|---|---|
| Genomic Position | scaffold2588:- 30172-38330 |
| See gene structure | |
| CDS Length | 1434 |
| Paired RNAseq reads | 156 |
| Single RNAseq reads | 410 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010823 (0.0) |
| Best Drosophila hit | lysyl oxidase-like 2 (2e-132) |
| Best Human hit | lysyl oxidase homolog 2 precursor (6e-92) |
| Best NR hit (blastp) | GA18160 [Drosophila pseudoobscura pseudoobscura] (1e-147) |
| Best NR hit (blastx) | GA18160 [Drosophila pseudoobscura pseudoobscura] (5e-147) |
| GeneOntology terms | GO:0004720 protein-lysine 6-oxidase activity GO:0005044 scavenger receptor activity GO:0055114 oxidation reduction GO:0016020 membrane GO:0005507 copper ion binding GO:0006464 protein modification process GO:0007155 cell adhesion |
| InterPro families | IPR017448 Speract/scavenger receptor-related IPR019828 Lysyl oxidase, conserved site IPR001695 Lysyl oxidase IPR001190 Speract/scavenger receptor |
| Orthology group | MCL10922 |
Nucleotide sequence:
ATGAGTTTAGCATTAATTTTGTGTAAAGACTTAAGTGAAAATGAACGAGCAACGCGAGCG
GCTTTTGTTCAAAGGTTGTTGAACAGTAATAAATATCTGGAGGGGAGAATAAAGTTAGTG
GGAGGATCGAATAAATACGAAGGCAATGTATACATCTACCACGCTGGTAGATGGGGTGCA
GTATGTGATGATTCGTGGGATGCAGCTGCCGCCACAGTCGTTTGTGGAATTTTCAATAAA
AGTGGCGCAGCGACGCACGGTGGACAGTTTGGTGAAACTGAAGAAAAATTTTGGATGGAC
GACATTGTCTGCGAAGGTGATGAAAAATCATTAACAGAATGTGTATTTTCTGGATGGGGG
TCTTCTGACTGTGAAAGCAACGAAGCAGCCGGTGTCATATGTAACGATAAAATTAAAAAT
TCTATCCCCATCAAGATAGAAGAAGAGGAAAAAATAAAAATACATGAAGTCGTCGATGTT
AGAACAGTGAGCTTAAGGCTCGTGGGAGGCAGAAGTAGCAGCGAAGGAAGAGTCGAAATT
TATTACAATGGAGTCTGGGGTAGCATTTGTCCTGATGGTTGGACTATCTTTGAGGCTGCA
GCTGTTTGTCGGCACCTTGCCCTCGGATTTGCTGAACAAGCTTTACAGACTGATTACTTT
GGAAACTCTGCTATAATTTTAAGCGGTGTAGCTTGTGAAGGGAATGAATCTAATTTGTTT
ATGTGCAAACATCGACAATTTGGTCAGACGTATTGTCCAGGAGATATTGGACATGTGGCT
GCTGTAGTATGCACTCAGTACTTAGCGGATCTTCACCTTGATTCGTTGGCTATAGTAAGA
AGTGCCCATCTTCAAGACGTACCTATGTTTCAACTGCAGTGTGCAATGGAAGAAAACTGT
TTGAGTAAATCCGCTTATGAGATACAAAAAACAAATCCGAATTGGCAATTCGAAACGCGG
CGTCTTTTGCGTTTCACAGCAGCATCGCTCAATATCGGCAACGCAGAATTCAGACCTTAT
CTACCGAAACATTTGTGGCAGTGGCATTTATGTCATATGCACTATCACAGTATGGAGGTA
TTCGCTACTTTCGATATTCTGGATATGACGGGACGTAGAGTAGCTGAGGGACACAAAGCC
TCATTCTGCTTGGAAGACAATACCTGCCTGCCGGGGGTCGAGAAAAAATACTCATGCAGA
AATTACGGCGACCAAGGTGTGTCTATCAATTGCTCGGATATATATCTTTACAATATCGAC
TGCCAATGGGTCGATGTAACGGACGTGGCTCCAGGAGACTATACGTTCAAAGTTGCTGTG
AACCCACACGCCCGCGTTGCAGAACAAAACTATCACAACAATGCTGCTGTGTGCTCACTA
CGTTTGTCGGATACTAACGCTTACGTTTACTCGTGTAATATGGAAAAGCCATAA
Protein sequence:
MSLALILCKDLSENERATRAAFVQRLLNSNKYLEGRIKLVGGSNKYEGNVYIYHAGRWGA
VCDDSWDAAAATVVCGIFNKSGAATHGGQFGETEEKFWMDDIVCEGDEKSLTECVFSGWG
SSDCESNEAAGVICNDKIKNSIPIKIEEEEKIKIHEVVDVRTVSLRLVGGRSSSEGRVEI
YYNGVWGSICPDGWTIFEAAAVCRHLALGFAEQALQTDYFGNSAIILSGVACEGNESNLF
MCKHRQFGQTYCPGDIGHVAAVVCTQYLADLHLDSLAIVRSAHLQDVPMFQLQCAMEENC
LSKSAYEIQKTNPNWQFETRRLLRFTAASLNIGNAEFRPYLPKHLWQWHLCHMHYHSMEV
FATFDILDMTGRRVAEGHKASFCLEDNTCLPGVEKKYSCRNYGDQGVSINCSDIYLYNID
CQWVDVTDVAPGDYTFKVAVNPHARVAEQNYHNNAAVCSLRLSDTNAYVYSCNMEKP