| New model in OGS2.0 | DPOGS212995 |
|---|---|
| Genomic Position | scaffold32:- 39887-41113 |
| See gene structure | |
| CDS Length | 1227 |
| Paired RNAseq reads | 2888 |
| Single RNAseq reads | 7818 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006907 (0.0) |
| Best Drosophila hit | isocitrate dehydrogenase, isoform C (0.0) |
| Best Human hit | isocitrate dehydrogenase [NADP] cytoplasmic (1e-180) |
| Best NR hit (blastp) | isocitrate dehydrogenase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | isocitrate dehydrogenase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0004450 isocitrate dehydrogenase (NADP+) activity GO:0005739 mitochondrion GO:0006099 tricarboxylic acid cycle GO:0006097 glyoxylate cycle GO:0051287 NAD or NADH binding GO:0000287 magnesium ion binding GO:0055114 oxidation reduction GO:0006102 isocitrate metabolic process GO:0005811 lipid particle |
| InterPro families | IPR004790 Isocitrate dehydrogenase NADP-dependent, eukaryotic IPR001804 Isocitrate/isopropylmalate dehydrogenase IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site |
| Orthology group | MCL13558 |
Nucleotide sequence:
ATGTCGAAAATTCAGGCTGGTCCAGTTGTTGATATTCTTGGAGATGAAATGACTAGAATT
ATCTGGGATTTAATTAAGAATAAATTGATTTTACCATTCTTGGACATTGAGCTTCATACT
TACGACTTAGGTATTGAGCATAGAGACAAAACGGAAGACCAAGTTACCATTGATTGTGCT
GAGGCTGTCAAAAAATATAATGTTGGTATTAAATGCGCCACTATCACTCCTGATGAGAAG
AGAGTAGAAGAATTTAACCTGAAAAAGATGTGGAAGAGTCCCAATGGTACCATTCGTAAC
ATCTTGGGGGGTACAGTTTTTAGGGAAGCCATTATTTGTAAAAACATTCCTCGTCTTGTA
ACCGGATGGGAAAAGCCCATTATTATTGGACGTCATGCTCACGCTGATCAATACAAAGCA
ACTGACTTTGTTGTTCCCGGAGAAGGCAAACTTGAACTGATATTCACTCCTCCATCTGGG
GAACCAATTAAGCACGTAGTTAATGACTTCAAGGGAGCTGGTGTAGCCATGGGTATGTTT
AACACTGATGCTTCTATTGTTGATTTCGCTCATTCGTCCTTCAAATATGCCCTGGACAGA
AAGTACCCTTTGTACCTTAGTACCAAGAACACCATTCTTAAAAAGTATGACGGTCGCTTC
AAAGACATTTTCCAAGACATTTATGAGAAGGAATATAAATCTCAATTTGAAGCCGCTGGT
ATTTGGTATGAGCATCGTCTCATTGATGATATGGTTGCTTACGCTATGAAGTCTGAGGGT
GGTTTTGTGTGGGCTTGCAAAAACTATGATGGAGACGTTCAGTCTGATTCTGTGGCTCAA
GGATACGGGTCATTGGGACTTATGACATCAGTTCTCATCTGTCCTGATGGAAAGACAGTC
GAGGCTGAAGCAGCCCACGGAACTGTTACTAGACACTTCCGCTTCTACCAACAAGGGAAA
GAGACATCCACTAACCCAATTGCCTCTATTTTCGCATGGACTAAAGGTCTCCTGCACCGT
GCCAAATTGGACAATAATGACGAGTTGAAAAAGTTCGCAGAAACTCTTGAGAAGGTCTGC
GTAGAAACGATTGAGTCTGGTATAATGACGAAAGATCTTGCAATTTGCATTAAGGGCATG
AATAATGTAAAGAGGTCAGACTACTGTGAAACATTTGAATTCATGGACAAGCTAGCTGAA
AATTTGAGAAAGAGTTTGGGTAAATGA
Protein sequence:
MSKIQAGPVVDILGDEMTRIIWDLIKNKLILPFLDIELHTYDLGIEHRDKTEDQVTIDCA
EAVKKYNVGIKCATITPDEKRVEEFNLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLV
TGWEKPIIIGRHAHADQYKATDFVVPGEGKLELIFTPPSGEPIKHVVNDFKGAGVAMGMF
NTDASIVDFAHSSFKYALDRKYPLYLSTKNTILKKYDGRFKDIFQDIYEKEYKSQFEAAG
IWYEHRLIDDMVAYAMKSEGGFVWACKNYDGDVQSDSVAQGYGSLGLMTSVLICPDGKTV
EAEAAHGTVTRHFRFYQQGKETSTNPIASIFAWTKGLLHRAKLDNNDELKKFAETLEKVC
VETIESGIMTKDLAICIKGMNNVKRSDYCETFEFMDKLAENLRKSLGK