New model in OGS2.0 | DPOGS212996  |
---|---|
Genomic Position | scaffold32:- 12732-35767 |
See gene structure | |
CDS Length | 1698 |
Paired RNAseq reads   | 237 |
Single RNAseq reads   | 721 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006908 (2e-161) |
Best Drosophila hit   | Ecdysone-inducible gene E1, isoform A (2e-65) |
Best Human hit | low-density lipoprotein receptor-related protein 2 precursor (2e-12) |
Best NR hit (blastp)   | PREDICTED: similar to GA16846-PA [Nasonia vitripennis] (3e-108) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC012794 [Tribolium castaneum] (5e-85) |
GeneOntology terms    | GO:0007561 imaginal disc eversion GO:0019898 extrinsic to membrane GO:0005515 protein binding |
InterPro families    | IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site IPR006149 EB domain |
Orthology group | MCL16725 |
Nucleotide sequence:
ATGCACAATTTCAATAATATGCTATACCAATGCTTCATTGTTCTTAATGCTCTGTTGAGC
GTCAGAGCGTTCTCCTTGGGATCCAGTTGCCGCTCCAATGTAGAGTGTAGAGTCACACAT
GCGCACTGCTCTAGGGGCGTTTGCGCGTGTCAGCCGTACTATGCACAGGTTGATAACTCT
ACTTGTCTCGAATCAACACTTCTGGGATCGGAATGTATAGTATCGGAACAATGTACCCTA
AAGGTAGCGTACAGCGCGTGCTTGGATGGCCTCTGTCGCTGTTCCGACGGACATTTACAA
TTCAGAAAGCATACTTGTCTGTCTCCCGCTCCACCGGGACACGTTTGCTACAGCAACGAA
CATTGTCGATTATGGGAGAAAGAGAGTCACTGTGAATTTGTAATACCAAATCTCTTTGGA
AGATGCGCTTGTAACACGAACTTCAAACAAAACGGAGAAAAGTGTTTGCCTCAAAAGGGA
ACAGCCTTTCCTACTGAAGCAGTGATTCTTGAACACGGTGCTTCTAAAACTGATATTATA
ATGGCATCGCCCTCAACTGTTGAATTGTCGAATAAATCATCAAAATCGCCAAGTAGTCCT
AGCGCTGAAAGTTTGTTTGGTAATCCTAATATCTCAGACTCGGATGACATTAAGCCAAGT
AATTTACCCATGTTCACGAGTAACAATGAAGTTCTAAGTACGCAAGAAGATAGTCCATTG
ATGCAAGCAGTTATGAAAGTTCCGACAGCGGAACCCAGTAAAAGACATCCAGTTTCAATA
AGAAAGGATGAAGAATCAAATGAGCTAATAGGTGTAGACGAAATGACAGCTAATTTACAT
GCAAACGATCAACCTATATACAGAGTAGTGACACAACCATCTGTAGACAAAAAACCAAAT
AAGAAAGGGGGAGTCAAGGATCCGAATACTAGTAAAACTAATAAAAGTCAGAAAAAATCT
TCATTAAAAGAGAAAAATCGTATCCGAGCTGATATAGTATCAACACCAGATCCAGGGCCA
GCATCATTGGGGTTGTTCTGTCTATCGGATAGTCAATGTCAGCTCGTTGATCCGAATACA
AGATGCTTGAACAAGAGATGCGATTGCACGTACCGAACTAATTCAACGTCTGCGTGCTCA
GCGCGTAATCGAGGATGTCTGCCTGGTACATTCCAATGCCGTTCAACTGGTGCGTGTATC
AGCTGGTATTTCGTTTGCGACGGACGGAAAGATTGCCCTGATGGGTCGGACGAAAGGTGT
CAAGGTACTGGTAAAGACAACACAGGCGAACGTTGTCCGATGCACTCGTTCCGATGCGGT
GGTCCTGGCAGCGCGTGCGTGTCTCGAGGAGCTCGGTGTGACGGCATTCCACAATGCGCT
GGTGGCGAAGACGAGAGGAACTGTCGTGCTACTAAACGGAGAGGTTGTCCGCGACATACA
TTCCGCTGCGGCTCAGGCGAGTGTCTACCCGAGTACGAGTTCTGTAACGCGATCATCTCC
TGCAAGGACGGCTCTGATGAACCGTCGCATCTATGTAATGAGCAGTCACGGTGGCGTGCG
GCGGACTTTTGTCCATTGAGGTGCGGTAATGGAAGGTGTCGGAGCACTGCTGTGGCTTGC
TCCGGAAGAGACGGCTGTGGAGACAACAGTGATGAAATAGCCTGCTCTGTCTGCAAATGT
CCAGCACAACCTTCTTAA
Protein sequence:
MHNFNNMLYQCFIVLNALLSVRAFSLGSSCRSNVECRVTHAHCSRGVCACQPYYAQVDNS
TCLESTLLGSECIVSEQCTLKVAYSACLDGLCRCSDGHLQFRKHTCLSPAPPGHVCYSNE
HCRLWEKESHCEFVIPNLFGRCACNTNFKQNGEKCLPQKGTAFPTEAVILEHGASKTDII
MASPSTVELSNKSSKSPSSPSAESLFGNPNISDSDDIKPSNLPMFTSNNEVLSTQEDSPL
MQAVMKVPTAEPSKRHPVSIRKDEESNELIGVDEMTANLHANDQPIYRVVTQPSVDKKPN
KKGGVKDPNTSKTNKSQKKSSLKEKNRIRADIVSTPDPGPASLGLFCLSDSQCQLVDPNT
RCLNKRCDCTYRTNSTSACSARNRGCLPGTFQCRSTGACISWYFVCDGRKDCPDGSDERC
QGTGKDNTGERCPMHSFRCGGPGSACVSRGARCDGIPQCAGGEDERNCRATKRRGCPRHT
FRCGSGECLPEYEFCNAIISCKDGSDEPSHLCNEQSRWRAADFCPLRCGNGRCRSTAVAC
SGRDGCGDNSDEIACSVCKCPAQPS