| New model in OGS2.0 | DPOGS204080 |
|---|---|
| Genomic Position | scaffold2858:+ 8384-15758 |
| See gene structure | |
| CDS Length | 1629 |
| Paired RNAseq reads | 2138 |
| Single RNAseq reads | 4966 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010815 (7e-111) |
| Best Drosophila hit | Eip93F, isoform B (3e-25) |
| Best Human hit | ligand-dependent corepressor isoform 1 (9e-11) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012464 [Tribolium castaneum] (1e-48) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC012464 [Tribolium castaneum] (6e-39) |
| GeneOntology terms | GO:0005634 nucleus GO:0007613 memory GO:0042803 protein homodimerization activity GO:0043565 sequence-specific DNA binding GO:0045893 positive regulation of transcription, DNA-dependent |
| InterPro families | IPR009057 Homeodomain-like IPR007889 Helix-turn-helix, Psq IPR011526 Helix-turn-helix, Psq-like |
| Orthology group | MCL18016 |
Nucleotide sequence:
ATGCTGCGCCGACAATCTTTACAAGCGGAGGACAAGCCGGGGAGTTCCCCGACCACGGAG
CAGCCCCTCGACCTGAGCGCCAAATCCACCTCCAGCACGAGTGGGACCCCACCACCGGAA
AAGGTGACCGACACCAGATTAAAACGTCCTCCGCTCGAGGCTTCGGGGAACAGCACGCGG
CGGACGTACACCGAGGATGAGCTGCAGTCAGCTCTCAGAGACATCCAGTCCGGGAGGCTG
GGCACGAGGCGGGCGGCCGTCGTGTACGGCATCCCGCGCTCCACGCTCAGGAACAAGTTC
AACAAGTTCGGGCTGGCGGCGGAAGCGGGCCCGGACTCCGAGCCGGACTCCGAGTCCGAC
AAGCCCGACTCGCCGCCATCCGTCATACTTAAGATCCCGACCTTCCCGCCGCCGGACGAG
AAGAGCCCCTCCCCGGCCGCCCCCGTCACCCCCCTCACTCCGCTCCTGCCTCCCCAGCCT
CCCCTCAACCCTCCGTCGCAGCTGCTCCTGTCTCCATCCGTGTTCGCGGACCCCTCCACC
CCCCGGCATCTCTTCACGTCGCTGAACGACGTCATCGCCAAGAGCATCAGCCAGAAGTTC
CAGCAGCCCTTAGAGCGCCCGCCCCCCGCCGACCTGCAATACCTCCGCCCGCCCGACAGA
CACGTGTCCGTCATCAAGACGCCCCCCGACAACCAGCGGTACTCCGCGCCCGGGAACTCC
AAGAACAACGGCCAGCCGCCGGCCGGGGGGAAGGGCACCAGACCCAAGAGGGGCAAATAC
AGGAACTACGACCGGGATAGTCTGGTGGAGGCCGTGAAGGCGGTGCAGAGGGGGGAGATG
TCCGTGCACCGCGCCGGCTCCTACTACGGAGTGCCCCACTCCACGCTGGAGTACAAGGTC
AAGGAGAGGCATCTCATGAGACCCCGGAAGCGCGAGCCCAAGCCGCCGCCCGACGTCAAG
CAGCCGCCGCCCAAGCCCTCGAAGCCGCCGACGAAGCCCTTCACGAACGGCCTCAACGGC
CCCGAGGCCTACCCGGCCGGCTACCCGTTCTGGTCGGGCGCTCCGCCCTTCAGACACGCG
CCCGACCTGTACGCCTCGCACATGATGCGGCGCTTGCAGGAGGAGGCGCCGCCGCCCGCC
AACGGCTCCTTCCTCGAGGGCATCATCAGGTCCAGCCTGGAGCGGCCCGGCGCCGCCCTG
CTGCAGCGGCTGGGAGCACCCGCCTCGCCCCCCGCCCCCGGCCCCGGTCCTGGCCCCGGA
CCCGGCCCCGGCGCGGCGGGTGACGCACTGCGCCGGCGACCGGACGCCGCGGACGAGTCG
GCCGCCAAGAGACCGCGCCTCGACACCGACCACCAGCTGGCGGCCGACATGAGGGAGGCG
GTGCAGAGGCTGCGGGCGGACAAGATGAGGCCCAGGAACGGCACCCCCCCCCGCCCCCCG
CACCGCCCGCCCAGGAGAGGGTCTAGCCTCACCGGGCACCGACATCACAATAGTTACCTT
ACACACACACACACAGAGACGACACACCGGACGGAGGCGCCCGGCGGACCAGCACCGGCA
CACTCCCCCCCCGACCCCCGACCGGCCCGGCCCGGCCCGGAGACCCTCGGTGCAGACCTC
GTTATGTAA
Protein sequence:
MLRRQSLQAEDKPGSSPTTEQPLDLSAKSTSSTSGTPPPEKVTDTRLKRPPLEASGNSTR
RTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKFNKFGLAAEAGPDSEPDSESD
KPDSPPSVILKIPTFPPPDEKSPSPAAPVTPLTPLLPPQPPLNPPSQLLLSPSVFADPST
PRHLFTSLNDVIAKSISQKFQQPLERPPPADLQYLRPPDRHVSVIKTPPDNQRYSAPGNS
KNNGQPPAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKV
KERHLMRPRKREPKPPPDVKQPPPKPSKPPTKPFTNGLNGPEAYPAGYPFWSGAPPFRHA
PDLYASHMMRRLQEEAPPPANGSFLEGIIRSSLERPGAALLQRLGAPASPPAPGPGPGPG
PGPGAAGDALRRRPDAADESAAKRPRLDTDHQLAADMREAVQRLRADKMRPRNGTPPRPP
HRPPRRGSSLTGHRHHNSYLTHTHTETTHRTEAPGGPAPAHSPPDPRPARPGPETLGADL
VM