| New model in OGS2.0 | DPOGS201281 |
|---|---|
| Genomic Position | scaffold1500:- 27196-28778 |
| See gene structure | |
| CDS Length | 1041 |
| Paired RNAseq reads | 905 |
| Single RNAseq reads | 2511 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003033 (2e-08) |
| Best Drosophila hit | drongo, isoform E (2e-39) |
| Best Human hit | arf-GAP domain and FG repeats-containing protein 1 isoform 3 (1e-41) |
| Best NR hit (blastp) | drongo protein isoform 2 [Tribolium castaneum] (4e-58) |
| Best NR hit (blastx) | drongo protein isoform 1 [Tribolium castaneum] (4e-49) |
| GeneOntology terms | GO:0003677 DNA binding GO:0046872 metal ion binding GO:0003723 RNA binding GO:0005794 Golgi apparatus GO:0005643 nuclear pore GO:0005634 nucleus GO:0008270 zinc ion binding GO:0007275 multicellular organismal development GO:0006810 transport GO:0016023 cytoplasmic membrane-bounded vesicle GO:0005515 protein binding GO:0032312 regulation of ARF GTPase activity GO:0007283 spermatogenesis GO:0030154 cell differentiation GO:0006406 mRNA export from nucleus GO:0043231 intracellular membrane-bounded organelle GO:0008060 ARF GTPase activator activity |
| InterPro families | IPR001164 Arf GTPase activating protein |
| Orthology group | MCL18478 |
Nucleotide sequence:
ATGGCTGCAAGCCGTCGCAAACAAGATGATAAAAATTTAGAAGTTTTACGTGAACTTATA
TCTTTAAATGGTAATAAATATTGTTTAGATTGTAATCAGAGAGGCCCTACCTATGTAAAT
ACAACGATTGGATCCTTTGTGTGTTCAAAATGTTCGGGAATGTTGCGTGGCCTTACACCT
CCTCATCGTGTAAAATCAATTTCTATGGCTACATTTACACCCGAGGAGATCGAATTTATT
AAAGTAAGAGGGAACGATTACTGCAGGCGTCTATGGCTGGGCTTATATGAGGGTGAAAGT
GTGAATTTTACTGATGAACAAAGAGTCAAAGATTTCATGTCTGATAAATATGAAAAGAAA
AGATACTATTTAGAGTCATCAGTTAATGATACTGCAATGACAAATGGAAATACCTCAGTA
AAGAATAAAGTGAAGAGCAAAGTATCCAGTAATATAGGAGTACCAACTCCTTTGATATCA
ATAACAGCCCAGGTTTCTAAGCCGAATGTGAATAATAATGTGGTCAACATGGCGAAAGTA
GTTAGCAATGTTAATGATAGCAGTTGTAAGCTGCCACGGCCAGTGAATAACTTTTCTCAG
CCTATGCTTAATAAAACAATTCCTGCAGCAGCAACAAACCCAATCCCTGTACCCGATTTT
CCTGTTGATTTCTCAACTGCAAATATTTACAACAGTTCCCAGTACAACAATAATCTTAAC
AACAACATCATGGTACAGCCATTTTCATCGAATACTCAGTCTTTCAATGCATTCAATTCC
CCCACTACAGCATCAAATGATCGTTATGCAGCCTTAGCTGATCTGGATTTGGCTTTAAGA
CAGCAAAACATGAAAAATATGGAGGACGGCAATAACATGGATAAAAATCCATTTCAAACT
TCATCTAGCAATGATGTATTTGCAAATAAAAATCCATTTTTTAATGGGGGTTGGAGTACT
AACACAGCGCCCACGCCAATCAATCCGTTTATGCCGGCAAACAATGGGGCCTTCATAAAT
TCTAAGAATCCCTTCCTCTGA
Protein sequence:
MAASRRKQDDKNLEVLRELISLNGNKYCLDCNQRGPTYVNTTIGSFVCSKCSGMLRGLTP
PHRVKSISMATFTPEEIEFIKVRGNDYCRRLWLGLYEGESVNFTDEQRVKDFMSDKYEKK
RYYLESSVNDTAMTNGNTSVKNKVKSKVSSNIGVPTPLISITAQVSKPNVNNNVVNMAKV
VSNVNDSSCKLPRPVNNFSQPMLNKTIPAAATNPIPVPDFPVDFSTANIYNSSQYNNNLN
NNIMVQPFSSNTQSFNAFNSPTTASNDRYAALADLDLALRQQNMKNMEDGNNMDKNPFQT
SSSNDVFANKNPFFNGGWSTNTAPTPINPFMPANNGAFINSKNPFL