| New model in OGS2.0 | DPOGS201283 |
|---|---|
| Genomic Position | scaffold1500:- 11268-13018 |
| See gene structure | |
| CDS Length | 1440 |
| Paired RNAseq reads | 150 |
| Single RNAseq reads | 415 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003034 (0.0) |
| Best Drosophila hit | CG31935 (3e-27) |
| Best Human hit | rab3 GTPase-activating protein catalytic subunit isoform 2 (9e-56) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013502 [Tribolium castaneum] (1e-81) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013502 [Tribolium castaneum] (8e-83) |
| GeneOntology terms | GO:0005097 Rab GTPase activator activity GO:0005737 cytoplasm GO:0017137 Rab GTPase binding GO:0005625 soluble fraction GO:0043087 regulation of GTPase activity GO:0005096 GTPase activator activity |
| InterPro families | ND |
| Orthology group | MCL10326 |
Nucleotide sequence:
ATGAATGAAGAAATAGATGAGTATGAAATTTATCATCAAGATTTTACAACAGCATCAGAG
TGGGAAGTATTAATTGCACGTTTGGAAGAAGTTATCGTTGAATGGCATTTGTCTAAATCC
AAAATAACAAAAAAGTGTTCAGAGTTTACAAAGAAATGGACTGTTAAATCGGAGGAAATT
AAGTTTCGTTCTTTAAATTTTACACTTTCTTACTGTTATCAAGAACCAGTTAAAGTACTG
GACTCTGATATGAATTCAGATGAACAGTCATTATTGACAGATTTGCATGACAGTCTTTGG
AATTCCACCACAAACTTTATGGCAGATACTGAATGCACGCCGTATCCAGTATCTAATTGG
TTTGGTTTGAAAAGATATCTGATGCTGTGTCCTAAAACCCCTCTAACTGATGGAAGTATC
ATTAAACTTGTAATGAGTTCCGTTAATATAGCCTTTGCAAATGTTGATTGTGGTGTGCCC
TTCTTTGTTAAGATACGAGAACATTGGCAGCAAACTTTTTTAGGTATTTATGAAGATAAT
GATTATAAAATTAGTTTTGATATGATACATTTGAAAAGAATATCAAATCAGTGTTCTCAT
CTGAGCGGCCTTGTAAGTTTATTCAAGTCTAAAATATCATCACCAGTGCCTCTTGATACT
GTTGTTATATCCACAAAATTTTCTTATGAATTGAAAGACTCTGAAGCCTTTGCTTGGAGG
AAAAGAACCCAATCAAATGAGTTTTTATCAATTGATGGATTTGATGTTAGAAAATTGACT
GAACTGCCATTTGGTTCGGAAAAGAATCCTCTACACAGTGCTCTACTTAATGCAATATGG
CCACATTTCAGGGAAAGTGCTATTGTTGATTCATCTACATTTTCTGATATTGATCCCTTA
ATGGCACCCACATGGACTATTACTCTGAAACTTAGAAATAACATAAACTGTCAATTATCA
GATATTATAGGAAAAGTGATGGATTTATTAGACAATAATACTCTAATAATGGATATTCTG
GGTTTGAGTAAGAGCCTGGGCTTGGTGAATCCATTGAACAGGATAACCGAGGCACCTATT
ACTATTTCTAAATTGGTGAAAGCAGCAGTGGGGCGTAATAGTCACATCTCTGAGTTTAAA
GGCCCAATAACTGATGACCTTTTGATGCCTTTGCTGTATTACGTGTTCCCTGATGCAGTG
GAAGACAATACATTCCCATATTCTAAAGGATTGGATATAGAAACCAGAAGGGATAGTACC
GATTCAAAACTATGCAGCTATGTTAAAACGAGTCCTGAAGATGGTTTGGTTTGGCGGCTG
TCAGTTACCTCAGCTCGTTTAATGGAGGCCGGTGGACTGCCTTACGTTGCACATTTCTGG
TATGAGTTCACCCAAGAGCTGCAGTATCGTTGGGAGCATAGAATTTTATTATCAGGGTAA
Protein sequence:
MNEEIDEYEIYHQDFTTASEWEVLIARLEEVIVEWHLSKSKITKKCSEFTKKWTVKSEEI
KFRSLNFTLSYCYQEPVKVLDSDMNSDEQSLLTDLHDSLWNSTTNFMADTECTPYPVSNW
FGLKRYLMLCPKTPLTDGSIIKLVMSSVNIAFANVDCGVPFFVKIREHWQQTFLGIYEDN
DYKISFDMIHLKRISNQCSHLSGLVSLFKSKISSPVPLDTVVISTKFSYELKDSEAFAWR
KRTQSNEFLSIDGFDVRKLTELPFGSEKNPLHSALLNAIWPHFRESAIVDSSTFSDIDPL
MAPTWTITLKLRNNINCQLSDIIGKVMDLLDNNTLIMDILGLSKSLGLVNPLNRITEAPI
TISKLVKAAVGRNSHISEFKGPITDDLLMPLLYYVFPDAVEDNTFPYSKGLDIETRRDST
DSKLCSYVKTSPEDGLVWRLSVTSARLMEAGGLPYVAHFWYEFTQELQYRWEHRILLSG