| New model in OGS2.0 | DPOGS201338 |
|---|---|
| Genomic Position | scaffold1500:+ 7730-10526 |
| See gene structure | |
| CDS Length | 2559 |
| Paired RNAseq reads | 30 |
| Single RNAseq reads | 108 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003122 (2e-145) |
| Best Drosophila hit | CG14351 (2e-129) |
| Best Human hit | leucine-rich repeats and immunoglobulin-like domains protein 2 precursor (7e-16) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014301 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014301 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005515 protein binding GO:0008045 motor axon guidance |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL16355 |
Nucleotide sequence:
ATGGTGATAAGCAACCTTCGTGTTCATATCGAAGACTTTTTGTTACAGGTCGTGCGATCC
CGTCTTCGTGCCCAGTGGTGGCTACCAACAGTCCTGATAGTGACTATTGTTCAAGGCACA
CGTGGTCAATGCCCGTGGATGGAAAACCCAGATTTACAAGCGACCTGTGTGTGTGCTTTC
AATTTAGCAAGACAGCTCTCAGTGCAATGTGACCAGGTAGATTTTCCGACACTACTATCA
GCATTGAATTCTAGCGCTGGAAAAATTTCCATAGACTTGCTATATATAAACAATGCGACG
ATTTCGTCACTAACCAGTGATATGTTTCGAAATTTAGCTATTTACAATCTACAAATATCA
GGCTGCAAGTTGAGGAAGATCGAAAGCAACGCCTTTAACGGGCAAGGCCAGTACTTGAAG
AATTTGAATCTACAAGACAACGAATTATCGGAGGTGCCTGTGAAAGCACTTAGAATATTG
ACAAACTTATCTCTGTTAGATCTGTCAAAAAACAAGATAACGCTAATCGAAAACTATTCG
TTTTCTACCCTTCAGGAATTAACAACGTTAAAATTATCAGATAATAATGTAACACTGGCA
CCGCAAGCCTTAGCTGGTTTGGAAAATTCTCTTAAAAATCTTAATTTAAAAGGAACTAGA
CAGAAGTCTGTTCCAGAATGTATACGAGGTCTACGAAGCCTTGCCTTTCTTGATCTGTCA
CAGAATAGTATACGAGAATTACCAGGCCCTGACGGCCCTCAAACTTTTGAAGGATTAGAT
TCTCTTACGGCTCTCAATTTAGAACGAAACTTACTTGTAAATTTAAAACATGGAGCATTT
TTACAAATCAAAAACACGCTGAGCTCGTTAAGTTTACTAAATAACCTTTTACCAGAATAT
CCAACAGAAGCAATATCCGTGTTATCAGAGTTGAGAGTGCTTGATATAGGTTTTAATTTA
CTCAACAAGATACCTTCAGATGCCTTTTTAAAGAATCCGTCAATAACCTTACTGGCTTTA
GATGGTAATCCATTGCCAACTGTGCCAGAAAAGGCTTTGGCTCATCTAAATTCTACATTG
AGAGGTCTTAGTCTTGGCGGCAGATTCTTGAACTGTGACTGTAAATTACGATGGATTATC
GAATGGATTCGTAATGGCGAACTACAGGTCACTTCACGCGAGAGAAATCCACAATTCTGT
GGAAACCCACCAGCATTCCGAGATCGTGGTTTTTACAGTTTTGAGCCGAATGAGTTAGTA
TGTGATCATGATACAACTGAAATAGTACAATCAACTCTCAAGTATAGTGATATAAATTAC
ACGACAACGTCGCCGGTGACAACTGCACAAGCAACTACTCCCGCATCAACTACCTTTAAT
GTTCCTTTGAACAGTGAATTTAATGAATCGTCAACAATTAAATCTTCTAGCACAACTCCG
GTAACTACCACTTCGAATAAACCTAGTCGCACTCCAGCAGTACGTCCGGCTGGCCCAAAT
TGGAGACATGCACCAAACCAAAGACCCCCATTAGTCATGAATTTCCCACAACAGAAACCA
AGTATAGATGACTCTAACGAAGTGAAAGTAAAAAATGCATACAGACAGGATAACTCTGTT
ATTATTCAGTGGGATTCAGATGTTGCTAATATTCTCGGATTTCGGGTAGTGTATCGTTTA
TTTGGAGATAAAAGTTTCAAACAGGGACCACCACTTGAAGCTAGCGAAAGAGAATTCAAA
ATTAAAAATGTTCCATCGCAGGAATGCATCGTTGTTTGCGTTATTTCTTTAGAAGAAATA
CACATAAGCCCAGAAACTGTGCCTTACACACAGTGTAGAGAAGTGCGCACGGTATCTGCA
GCTGCTACTAATATGGATAAAATCACTATAGCAGCCAGTGCAGCAATATGTGGCACCATT
GTTGTAGCTGTTCTTGTCTTCGCAGCTGCATCACGTCGTCGTTCCAGAACCGTTCACCGT
TTACACTCACAACTTCCCGAAAAAGTACCAAACTCATGCTGTGGTGGACTTGCTGGAACT
CCAAGTCCGAGTGGCCCATTATCTTCTCTTGCTACAATAGGTGCCTTTGGTAAACAGCGC
GAATGGGATCAAGTGTCAGCGTATAGTGCGAGATCAATACCTCGCGCACGATCTTACACC
GAACCTCCACCACCGGAGACAGTACCAGGTAGGCCTGGAAGGGCAAGATCTTTAGCAGAT
GGTCAGTCACAACACAGCTACTCTGCCCGCTATGGAGCTTCAGGATACCCAACGAGTTTA
TTAGGATCACGAACTGATCTACGCCAATCACGACAGTCTTTAGGGGGAGCTTCTGAAAGA
GCGTCCCGTTTATCCTTAAGCGGAGCTGCGGGTGGAGTTACAAGCGGTACATCAGGGTCT
AGAAGGAGACCGAGATCTCGCTCGCGACCTGCCAGTCGCTATAGCGTTGGCTCTATTGGA
ATGGGTTACTGTGATACTTCGGATAATTGGACTGATCACGATATGGATATATACATGACC
CGTAATGCAACAGCCAGAGGTGGTTTAGTGCCCTTATAG
Protein sequence:
MVISNLRVHIEDFLLQVVRSRLRAQWWLPTVLIVTIVQGTRGQCPWMENPDLQATCVCAF
NLARQLSVQCDQVDFPTLLSALNSSAGKISIDLLYINNATISSLTSDMFRNLAIYNLQIS
GCKLRKIESNAFNGQGQYLKNLNLQDNELSEVPVKALRILTNLSLLDLSKNKITLIENYS
FSTLQELTTLKLSDNNVTLAPQALAGLENSLKNLNLKGTRQKSVPECIRGLRSLAFLDLS
QNSIRELPGPDGPQTFEGLDSLTALNLERNLLVNLKHGAFLQIKNTLSSLSLLNNLLPEY
PTEAISVLSELRVLDIGFNLLNKIPSDAFLKNPSITLLALDGNPLPTVPEKALAHLNSTL
RGLSLGGRFLNCDCKLRWIIEWIRNGELQVTSRERNPQFCGNPPAFRDRGFYSFEPNELV
CDHDTTEIVQSTLKYSDINYTTTSPVTTAQATTPASTTFNVPLNSEFNESSTIKSSSTTP
VTTTSNKPSRTPAVRPAGPNWRHAPNQRPPLVMNFPQQKPSIDDSNEVKVKNAYRQDNSV
IIQWDSDVANILGFRVVYRLFGDKSFKQGPPLEASEREFKIKNVPSQECIVVCVISLEEI
HISPETVPYTQCREVRTVSAAATNMDKITIAASAAICGTIVVAVLVFAAASRRRSRTVHR
LHSQLPEKVPNSCCGGLAGTPSPSGPLSSLATIGAFGKQREWDQVSAYSARSIPRARSYT
EPPPPETVPGRPGRARSLADGQSQHSYSARYGASGYPTSLLGSRTDLRQSRQSLGGASER
ASRLSLSGAAGGVTSGTSGSRRRPRSRSRPASRYSVGSIGMGYCDTSDNWTDHDMDIYMT
RNATARGGLVPL