New model in OGS2.0 | DPOGS201340  |
---|---|
Genomic Position | scaffold1500:+ 21200-25326 |
See gene structure | |
CDS Length | 1788 |
Paired RNAseq reads   | 335 |
Single RNAseq reads   | 893 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003124 (0.0) |
Best Drosophila hit   | cdc23 (6e-132) |
Best Human hit | cell division cycle protein 23 homolog (1e-128) |
Best NR hit (blastp)   | PREDICTED: similar to CDC23 (cell division cycle 23, yeast, homolog) [Nasonia vitripennis] (3e-152) |
Best NR hit (blastx)   | PREDICTED: similar to CDC23 (cell division cycle 23, yeast, homolog) [Nasonia vitripennis] (9e-151) |
GeneOntology terms    | GO:0004842 ubiquitin-protein ligase activity GO:0005680 anaphase-promoting complex GO:0000090 mitotic anaphase GO:0005488 binding GO:0030071 regulation of mitotic metaphase/anaphase transition GO:0006911 phagocytosis, engulfment GO:0007113 endomitotic cell cycle |
InterPro families    | IPR011990 Tetratricopeptide-like helical IPR019734 Tetratricopeptide repeat IPR007192 Cdc23 IPR001440 Tetratricopeptide TPR-1 IPR013026 Tetratricopeptide repeat-containing |
Orthology group | MCL12042 |
Nucleotide sequence:
ATGCAGCCTTTACTTAATACAAAAGGAGATATTCAAATTGATCTAAATCAGGTTAGAATA
GATATTTTACATGGAATACAAGAATGTAACGATCGTGGATTAATGCAAACCGCGAAGTGG
CTTTCGGAATTAAATTTTGCTCTAAAAGATCACAAAATTAGTTCTGAAATTCCGAATAAA
GCAGAGGACGACATTGTGACCGAAGAAAAGGAGGCTTACACTCTTGCAAAAAGTTTGTTT
GACTGTCAAGAATTTGATAGAGCAGCGTATTTTTTAGAGAACTGCACCAGTCCTAAATGC
GTGTTTTTACTTCGATATTCACAATACATGTCAAGTGAGAAGAAACGCCTGGATAATGCC
ACTGATACGGGAAATGAAAATTCGGAATCCACTCAAGTATTACTAGACTTATTATCTTTT
TTTAAGGCTAACCGAAATAGTTTAGATGGATATCTTTTATATTTAGAAGGGGTTGTATTG
AAAAAATTAGATTTGAGGAGTCAAGCAGTGACAGTGTTGCAAGCCTCAGTGGCGGCAACT
CCAACCCTTTGGTCAGCGTGGGTGGAACTGGCTGGGCTAGCTAATGAGTATGAAGCTTTG
GACTCATTACAGTTACCAAAACATTGGATGATGTATTTCTTTGCTGCTCATGCATTTGTA
GAATTGAAATTATCAGAACAAGCTCTTGAAGCTTACATGGTGCTTGCTACAGCCGGATTT
GATAAGAGCACTTACATAACAGCACAAATGGCTATCGCACATCATGACAGGAGAGATGTT
GATTCATCTTTAGCTCTGTTTAGAGATTTATACCAAAGTGATCCATTTCGTTTAGACAAC
TGGGATGTTTACTCACATCTTTTATATTTAAAGGAGAAACGAATGGAACTAGCTAACTTA
GCACAGAAAGCTGTGTCAATAGATAAGTACAGAGTTGAAACATGCTGCGTTATAGGTAAC
TATTACAGTTTAAGAAGCGAACATCAAAAAGCGGTGATATATTTTCAAAGAGCGTTGTCG
CTGGATCCACAGTATCTATCAGCATGGATTCTGATGGGTCATGAGTTTATTGAATTGCAG
AACTCCAACGCTGCTATCCAGTGCTACAGACAGGCAATCGATGTAAATAGAAATGATTAT
AGAGCATGGAACGGTCTGGGTCAAGCCTATGAGATTTTGGGGCTCAATGGTTACTGTATA
TATTATTATTCGAGAGCTGCACAACTCAAACCTGATGATTCAAGGATGCTAGTCTCACTC
GGAGAGGCCTATGAGAAGATGGATAAAATACCAAATGCACTAAAATGTTATTACAAAGCT
CACAGCACTGGCGATATCGAAGGGATGGCTTTATTCAAATTGGCTAAGTCCAATATACTC
TTTAGCTTTATGCCGAATAGTGCAGCCGCTGCGTACACAGCAGCCTGCCAAGAGCCGGCC
AACGCCGGCAGCAAGGAGTTGCCGGCAGCACAACGCTATCTGGCGCAGTACTATCTACGG
TTTTCATTGCTGGACCACGCTTCACATTACGCGTACAAGTGTCTAGAACACGAAAGTACC
AAAGAAGCTGGTAAGAATATACTCAAGACTATATCAGAGAAACGTCTCGCAGCGTCAACT
TCAGCTCAGCCGCCATCTTTACCTGAAGACCTACCGGAAGCAATCAAGAACATTTCCGCA
TCATTAACCCAAGATACGCCAAAAACTCCATTCCCCAGCCCCAACGTCACTCCAGACAAT
TTTTCAACGCCGATGTTCACAAGAAAGAGTAGTAAATACAAAATGTGA
Protein sequence:
MQPLLNTKGDIQIDLNQVRIDILHGIQECNDRGLMQTAKWLSELNFALKDHKISSEIPNK
AEDDIVTEEKEAYTLAKSLFDCQEFDRAAYFLENCTSPKCVFLLRYSQYMSSEKKRLDNA
TDTGNENSESTQVLLDLLSFFKANRNSLDGYLLYLEGVVLKKLDLRSQAVTVLQASVAAT
PTLWSAWVELAGLANEYEALDSLQLPKHWMMYFFAAHAFVELKLSEQALEAYMVLATAGF
DKSTYITAQMAIAHHDRRDVDSSLALFRDLYQSDPFRLDNWDVYSHLLYLKEKRMELANL
AQKAVSIDKYRVETCCVIGNYYSLRSEHQKAVIYFQRALSLDPQYLSAWILMGHEFIELQ
NSNAAIQCYRQAIDVNRNDYRAWNGLGQAYEILGLNGYCIYYYSRAAQLKPDDSRMLVSL
GEAYEKMDKIPNALKCYYKAHSTGDIEGMALFKLAKSNILFSFMPNSAAAAYTAACQEPA
NAGSKELPAAQRYLAQYYLRFSLLDHASHYAYKCLEHESTKEAGKNILKTISEKRLAAST
SAQPPSLPEDLPEAIKNISASLTQDTPKTPFPSPNVTPDNFSTPMFTRKSSKYKM