| New model in OGS2.0 | DPOGS215391 |
|---|---|
| Genomic Position | scaffold486:- 7370-10027 |
| See gene structure | |
| CDS Length | 909 |
| Paired RNAseq reads | 1190 |
| Single RNAseq reads | 3297 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012437 (9e-123) |
| Best Drosophila hit | epsilonCOP (6e-31) |
| Best Human hit | coatomer subunit epsilon isoform a (4e-71) |
| Best NR hit (blastp) | coatomer protein complex subunit epsilon [Bombyx mori] (1e-127) |
| Best NR hit (blastx) | coatomer protein complex subunit epsilon [Bombyx mori] (2e-118) |
| GeneOntology terms | GO:0015031 protein transport GO:0000139 Golgi membrane GO:0030126 COPI vesicle coat GO:0016192 vesicle-mediated transport GO:0006890 retrograde vesicle-mediated transport, Golgi to ER GO:0031410 cytoplasmic vesicle GO:0005737 cytoplasm GO:0016020 membrane GO:0005794 Golgi apparatus GO:0005515 protein binding GO:0005198 structural molecule activity |
| InterPro families | IPR006822 Coatomer, epsilon subunit IPR011990 Tetratricopeptide-like helical |
| Orthology group | MCL15602 |
Nucleotide sequence:
ATGGCACGTCAGCAACAAGATGTAGATGAATTGTTCGATGTTAAAAATGCATTCTACGTT
GGGAATTATCAACAAGCAATAAACGAGGCCCAAAATGTTAAGCCCTCATCTCCACAAGTG
GCCTTCCAGAGAGACACATTCCTCTACAGATCGTACATAGCTCAGAACAATTTCCGTATT
GTTCTACAAGAATTGAAAAATGCTGATCCAATGCTTCAGCCGCTGCAAACGTTGGTTGAA
TATTTGTCCCCTGATTCCAATAAGCCTAATATTGTAGCTGACATTGATGCAAGGGTGCAA
AAAGGAGTGGAACTAACAAATGAAGTGTTTCTGATAGTCGCCGCAACAATTTACTATCAT
GAGGATAATTATGAAGCTGCCCTCAAAATATTGCACGAGGCGGAGTCGTTAGAGCTACGT
GCATTCAGTCTCCAGTGCCTATTGGCTATGAACCGACCCGACCTGGCCAGGAAGCAACTC
AAGAAGTTACAGGATATAGAAGACGACAGTACACTGACACAGCTCGCTCAGGCCTGGTTG
AATTTGTCAGAGGGTGGTCCAGGTGTACAGGATGCTCATTTCAGTATAATGGAACTGTCG
GAGCGTCTCGGCGCGCTGGGGGCCGGGCCGGCAGCCGCAGGGGCCGCCGCGGCCGCCTCG
AGAGGTATGTGGGATGAGGCGGAGCAGATGTTGACGGAAGCTCAGACCCGCCTGCCCCAG
CAGCCCGAGTTGTTGTTGGGCCTGGGGGTCGCGGCCGCGCACGTCGGCAAACCTCCCGAG
GTATCGGCTCGTTACTTCGCCCAGCTCTTGGACTCGCATCCTGACCATCCTTTCTCTAAG
GAGTACAACGCTAAGACCAACGAGTTCAAACGACTGGCGGCGCAGTACCAACCCTCTGTT
GCAAGCTAA
Protein sequence:
MARQQQDVDELFDVKNAFYVGNYQQAINEAQNVKPSSPQVAFQRDTFLYRSYIAQNNFRI
VLQELKNADPMLQPLQTLVEYLSPDSNKPNIVADIDARVQKGVELTNEVFLIVAATIYYH
EDNYEAALKILHEAESLELRAFSLQCLLAMNRPDLARKQLKKLQDIEDDSTLTQLAQAWL
NLSEGGPGVQDAHFSIMELSERLGALGAGPAAAGAAAAASRGMWDEAEQMLTEAQTRLPQ
QPELLLGLGVAAAHVGKPPEVSARYFAQLLDSHPDHPFSKEYNAKTNEFKRLAAQYQPSV
AS