| New model in OGS2.0 | DPOGS215402 |
|---|---|
| Genomic Position | scaffold486:+ 46483-51469 |
| See gene structure | |
| CDS Length | 1209 |
| Paired RNAseq reads | 1570 |
| Single RNAseq reads | 4197 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012436 (5e-94) |
| Best Drosophila hit | CG11360 (3e-38) |
| Best Human hit | RNA-binding protein MEX3B (8e-40) |
| Best NR hit (blastp) | mex-3 protein [Tribolium castaneum] (4e-93) |
| Best NR hit (blastx) | mex-3 protein [Tribolium castaneum] (2e-67) |
| GeneOntology terms | GO:0003723 RNA binding GO:0005515 protein binding GO:0008270 zinc ion binding GO:0046872 metal ion binding |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR004087 K Homology IPR001841 Zinc finger, RING-type IPR018111 K Homology, type 1, subgroup IPR004088 K Homology, type 1 |
| Orthology group | MCL11956 |
Nucleotide sequence:
ATGCCATCCGTCCGTGCAGACGGCAACGTACCGTCTGGACGAACGTCATCGGAAATCCGA
CCTACAGACACAGAACACAGTTCGATCAACCCCGAGCTGCCCCGCGCCCCCGGCCCCCGC
CCCGGCTCTTGCCCCGGCCTTCGCCCCTCGCCGCACACCTTCGGCATCGCCATCAATCAT
TCCGACGCCTCGATGACCGCGAGTCGTTTCAATAAGAAGCGTATTGTTGTGTCGCTAGAG
ACTGTTTCGCAGTGCGTCGGGTTCGATGACTTACGACCTGCTCAGACTCCTCGCTACCTC
CTCGTCACCTCTGTAGCCCTGGTATTATGGTGCAAGATCAAAGCTCTACGCGCCAAGACC
AACACATACATCAAGACTCCGGTGCGCGGTGAGGAGCCCGTGTTCGTGGTGACTGGTCGC
AAGGAAGACGTCGCACGCGCCAAACGCGAGATCCTCTCCGCCGCCGAGCACTTCTCGCAA
ATTAGAGCTTCGCGCAAATGTGGAGCTGCGCCCCCGCCCCCGGCCGGAGCGCCCGGACAT
GTGACCGCACAGGTGCGCGTCCCATACCGCGTCGTGGGACTGGTCGTGGGTCCCAAGGGC
GCCACCATCAAACGCATCCAACACACCACTCACACGTACATCGTGACACCGTCGAGGGAA
CGCGAGCCCGTGTTTGAGGTGACCGGGCTCCCGGAGAGCGTGGAGGCAGCTCGCAAGGAG
ATCGAGGCTCACATCGCTCTTCGTACCGGAGCTGCCAACGGAGCGACCGGCGCGGGCGCG
GTGGCCGGGGCGGAGGGCGAGCCCCTCGCTCAGCTGTACCGCGCTGGACTCGCGTCTTTG
TTGCGTCCCGAACAGGAGGCCGCGTTTTCCTCCGCGGGATCTTGCTCGTCAGGCGGCTCC
TCGGGGCGGCTCGGCGACCTGCTCGGCATCTGGTCCTCGACGGAGCGTGACGAAGGTCTC
GGCGAGTCCCCGTCGTTCGAGTCCCCCGGCGCGGGCGGCGTGTGGGCGTGGGGTCCACCG
CGCCCGTCGCCGGCCGCGTCTCCCGCTCGCACGTGCGGTCTCTGCTCGGAGCGCGGGGTG
TCAGCGGCGCTGGTGCCGTGCGGTCACAACCTGTTCTGTTTTGAGTGCGCACAGCGGCTC
GCCACGTCGGGGGCGGCGTGCCCGGCCTGTGCCTCTCCGACGCATCAAGCCATCCGCATC
CTATCGTAA
Protein sequence:
MPSVRADGNVPSGRTSSEIRPTDTEHSSINPELPRAPGPRPGSCPGLRPSPHTFGIAINH
SDASMTASRFNKKRIVVSLETVSQCVGFDDLRPAQTPRYLLVTSVALVLWCKIKALRAKT
NTYIKTPVRGEEPVFVVTGRKEDVARAKREILSAAEHFSQIRASRKCGAAPPPPAGAPGH
VTAQVRVPYRVVGLVVGPKGATIKRIQHTTHTYIVTPSREREPVFEVTGLPESVEAARKE
IEAHIALRTGAANGATGAGAVAGAEGEPLAQLYRAGLASLLRPEQEAAFSSAGSCSSGGS
SGRLGDLLGIWSSTERDEGLGESPSFESPGAGGVWAWGPPRPSPAASPARTCGLCSERGV
SAALVPCGHNLFCFECAQRLATSGAACPACASPTHQAIRILS