| New model in OGS2.0 | DPOGS200783 |
|---|---|
| Genomic Position | scaffold2064:+ 88-9593 |
| See gene structure | |
| CDS Length | 3150 |
| Paired RNAseq reads | 2318 |
| Single RNAseq reads | 6634 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001818 (4e-62) |
| Best Drosophila hit | Nup98 (7e-65) |
| Best Human hit | nuclear pore complex protein Nup98-Nup96 isoform 4 (3e-72) |
| Best NR hit (blastp) | GK13519 [Drosophila willistoni] (1e-115) |
| Best NR hit (blastx) | GI24505 [Drosophila mojavensis] (2e-79) |
| GeneOntology terms | GO:0005643 nuclear pore GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR007230 Peptidase S59, nucleoporin |
| Orthology group | MCL10704 |
Nucleotide sequence:
ATGAAACCTCAGCTTAGACCTGTGCCGGTCAGGTCAGGATCTTTCAACGCCGGGGCCAGT
ACATCATCACCGTTCAGTGGTTTCAAACCTGCGGCCAGCACCAGCGGCTTCGGAGCAGCC
CCGGCCTTCGGAGCCACCGCCGCCCAGCAACCGGCTACAGGCGGAGTCACCCGGGTGACA
TTCACCTGGACACGTCCGTCAGCCGCCCGGAGTAACGCTTGTAATGCACCAGGTCTATTC
GGCTCCACGAACACGTCGGGCGGTCTATTCGGGGGCACCACGTCCACCTCCTCCGGGTTC
GGCTCGTCCGGCTTCGGGTTCGGAGGGACCTCCAGCGGCGGGCTGTTCAACAACACCAGC
GGGGGACTGTTCGCCAACAACCAGAACACCAGCGCCTTCGGAGCTAAGCCTGCTACAGGG
TTCGGGTTCGGTGCGGGCTCGGCCCCGGCCCCCAGCGGAGGCCTCTTCGGGTCCCAGCCC
TCCACCTCCACGGGGATCTTCGGCCAGCAGAACAATACCCTCGGGACGGGCCTGTTCATT
AACAGCGCCGGCGGGTTCGGCCAGCAGGCGCAGGGCACGGCTCACGTGAAGTACAACCCG
GTGGTGGGGACGGACGTGGTGGTGAAGTCGGGCTCCTCGCAGAACGTGAACATCAAACAC
CACTGCATCACCTGCATGAAGGACTATGAGAGTAAGTCCCTGGAGGAGCTGCGTCTGGAG
GACTACGTGGCCGGCAGGAAGGGAGCCAGCGGAGTGTTCGGCTTCCAGCAGACGGAAAAC
AAGCCGCTGTTCGGAACCAGCTCCAATACCTTCTCGTTCGGGGGCGGCGCGCAGCCGGGG
GCGCAGACCACGGGCCTGTTCGGAGCCAACAAGCCGGCCTTCGGCGCCACCACCAACACC
GGCACGAGTCTTTTCTCAACAACGACGACCCAAGCCCCGGCCTTCGGCACCGCCACATCC
ACATTCGGCTTCGGAGCCAACACACAGAACCAGCCGGGAGGGTTGTTCAACAGCAAGCCG
GCGACCACGGGCTTCGGCTCCACCCCCAGCTCGGGCTTCGGGGGCTTCGGCACCGGCATG
TTCGCCAAAACTAACACCACCACCGCCAGCTTCGGCACCACCACGCCCGCGTTCGGCTCC
ACGGGCTTCGGCACCAACACCTCGGGCTCCAGCCTGTTCGGGAACAACACGTTCGGGAAG
CCGGCGACAACGACGCCCTCGTTCGGATTCAACACACAACCTACCCTCGGTCTAGGCGGC
GGCCTGGGCTCATCGTTCCAGTCCAAGCCGGCCAACTCGGGCTTCGGCACACTGGGAGGG
ACGGGCTCTCTGTTCCAGCAGCCGGCTCAGAACACCTTCAGAACCGACTCGGGCGTGGGC
GGAGGTCTGTTCAACAACACCTTGGGCTCGCTGGGCGCCACGCAAGTCAACAACGCCAGC
GTCGCGGGTGGGAATGGCTGGGCCCCGCTCGCTGGTCACGTGACATCCGCCAGCGACAGG
ATCCCGTATATTCCTACCCTCGCATTGATCACAGTACATATAGCTGTCTGTATGTGCAGG
GCTCCGCTGGGCGGCTCGTCCAACGTGCACGAACAAATACTCACTCTAGTAGCGAGACCC
TACGACACTCCGCTCTTCAAAGACCTCGCTCCGGACACAGCGACATCTACCGAGGAGGTG
CTGAAGCCGACCAACCCCTCGGCGGTGAGGGCGGTGCTGGACTCGTACAAGGTGTCGCCC
AACAACAGGACCAGGGTCACGGTCCGGCCCGGGCCTCATAAGCACGACAAGAAGTCTCTG
TTCGACGGCCTGGAGGAGGGAGACGCCAGCGTGGAGGACAAGCTGACGACACGACCCAGC
AGGAAGAGGCTCGTGCTGAGGAACAGGCCGCCAGCCGACAGGTCGCTGGAGGAGAGTCAA
CAGAACGGCGGCGAGGAGCGCCCGGCGGCGGAACACGAGAAGGCCGACGGCGAACACACG
CAGAGCGACGCCGCGGCGAATCGGCACGGCAGCTGGCTCGCGTCTCCGAAGAACTCAAAC
TCCTGGAAGGAAAATGAGAAGCCGGCTGACAGTGAGCCGGCTGCGAGGCTGTACCCCGAC
CTGGAGAAGGAGCTCCCGCCGCAGGTGCCGGACAGACGGGCCAGCTGGCTGTCGTCTCTG
CCCCTGCGCCCTCTGCCGGGGTCTCTGGACGCGGAGAGCTCCGTCAGGGAGCTGGTCCGG
GGAGGCAGGGACAAAGTATCCGAGGAGGAGAATATTCCCCCCCGGGAGGTCGCGCCCCAC
CCGGCCGGGGTCAAGCTGACGAGGCCGGGATACTACACCATACCCAGCCTGGAGGAGATG
ACTGAGTATCTCCGACCCGATGGTTCCTGCCGCGTGCCTCACCTCACCATCGGCAGGAAG
AACTACGGGAACGTGTTCTACGACTGTGAGATCGACGTGGCCGGCCTCGACCTGGACCAC
CTGGTCCACTTCCTGAACAAGGAGGTGATCATCTACCCCGAGGACGAGGGGAAGCCGCCG
GTCGGCTCGGGTCTCAACCGCCGGGCCGTGGTCACGCTCGAGAGGGTCTGGCCCCGCGAC
AAGACCGAGAGGAGGCCCGTCACGGAACCCGACAGGTTACTGAAGATGGACTACGAGGGC
AAGCTGAGGCGGGTGTGTGACAAGCACGACACCAAGTTCATAGAGTACAGGCCGCAGACG
GGCAGCTGGGTGTTCAGGGTGGAACACTTCAGCAAGTACGGCCTGACTGACTCGGATGAG
GAGGACGACATCACACCCAACATACTTAAGAGACAGCTGGTGGACCAGAACTTGCAGCAA
TCTGCAGCACCTCCTAAGCCGCCGCCACCGTCTGCCGGCCAGCAGCCAGGTCTAGGAGGT
CTCGGAGGTCCGGTCGCTCCGGCTACATCGGGGCCGGGACTGAGCGGGTCCGGCGCGGGT
CCAGCGGGCCCCGGCCTCACCCTCGGCCTGTCAACAACCTCCGTAGGGAGAGACGAGTAC
ATGGAGCAGACATCACTCAACCTGTTGAACGGAACTAATAAAGGTTGGCTTGTATATATA
ATTCCACTGTACGTGTGCACGTCAGTCCGCGACGCCGCGGAGGGTTCAGACTCACGAATT
GTCCCGGCAGATGGCGCTGTCTGTGTGTAG
Protein sequence:
MKPQLRPVPVRSGSFNAGASTSSPFSGFKPAASTSGFGAAPAFGATAAQQPATGGVTRVT
FTWTRPSAARSNACNAPGLFGSTNTSGGLFGGTTSTSSGFGSSGFGFGGTSSGGLFNNTS
GGLFANNQNTSAFGAKPATGFGFGAGSAPAPSGGLFGSQPSTSTGIFGQQNNTLGTGLFI
NSAGGFGQQAQGTAHVKYNPVVGTDVVVKSGSSQNVNIKHHCITCMKDYESKSLEELRLE
DYVAGRKGASGVFGFQQTENKPLFGTSSNTFSFGGGAQPGAQTTGLFGANKPAFGATTNT
GTSLFSTTTTQAPAFGTATSTFGFGANTQNQPGGLFNSKPATTGFGSTPSSGFGGFGTGM
FAKTNTTTASFGTTTPAFGSTGFGTNTSGSSLFGNNTFGKPATTTPSFGFNTQPTLGLGG
GLGSSFQSKPANSGFGTLGGTGSLFQQPAQNTFRTDSGVGGGLFNNTLGSLGATQVNNAS
VAGGNGWAPLAGHVTSASDRIPYIPTLALITVHIAVCMCRAPLGGSSNVHEQILTLVARP
YDTPLFKDLAPDTATSTEEVLKPTNPSAVRAVLDSYKVSPNNRTRVTVRPGPHKHDKKSL
FDGLEEGDASVEDKLTTRPSRKRLVLRNRPPADRSLEESQQNGGEERPAAEHEKADGEHT
QSDAAANRHGSWLASPKNSNSWKENEKPADSEPAARLYPDLEKELPPQVPDRRASWLSSL
PLRPLPGSLDAESSVRELVRGGRDKVSEEENIPPREVAPHPAGVKLTRPGYYTIPSLEEM
TEYLRPDGSCRVPHLTIGRKNYGNVFYDCEIDVAGLDLDHLVHFLNKEVIIYPEDEGKPP
VGSGLNRRAVVTLERVWPRDKTERRPVTEPDRLLKMDYEGKLRRVCDKHDTKFIEYRPQT
GSWVFRVEHFSKYGLTDSDEEDDITPNILKRQLVDQNLQQSAAPPKPPPPSAGQQPGLGG
LGGPVAPATSGPGLSGSGAGPAGPGLTLGLSTTSVGRDEYMEQTSLNLLNGTNKGWLVYI
IPLYVCTSVRDAAEGSDSRIVPADGAVCV