| New model in OGS2.0 | DPOGS200783 |
|---|---|
| Genomic Position | scaffold2064:+ 9734-14654 |
| See gene structure | |
| CDS Length | 2367 |
| Paired RNAseq reads | 2899 |
| Single RNAseq reads | 7078 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001818 (5e-139) |
| Best Drosophila hit | Nup98 (7e-20) |
| Best Human hit | nuclear pore complex protein Nup98-Nup96 isoform 1 (8e-25) |
| Best NR hit (blastp) | nuclear pore complex protein nup98 [Aedes aegypti] (5e-48) |
| Best NR hit (blastx) | nuclear pore complex protein nup98 [Aedes aegypti] (1e-45) |
| GeneOntology terms | GO:0006260 DNA replication GO:0006999 nuclear pore organization GO:0031080 Nup107-160 complex GO:0000776 kinetochore GO:0005215 transporter activity GO:0005654 nucleoplasm GO:0005635 nuclear envelope GO:0016020 membrane GO:0044419 interspecies interaction between organisms GO:0006913 nucleocytoplasmic transport GO:0005515 protein binding GO:0015031 protein transport GO:0051028 mRNA transport GO:0055085 transmembrane transport GO:0031965 nuclear membrane GO:0005643 nuclear pore GO:0005634 nucleus GO:0000059 protein import into nucleus, docking GO:0017056 structural constituent of nuclear pore |
| InterPro families | IPR021967 Nuclear protein 96 |
| Orthology group | MCL10704 |
Nucleotide sequence:
ATGGACTTCACTGAGGACGGGGACCAGAACAGTCTGTACCAGGACGGAGGTGTGTGTGTG
AAGAGCCCCACTAGTGAGCTGGCCCGCCTGGAACACCGCGGCAGCCACCGCCTGCAGCTG
ATGAAGGCCAGCCTGTACGCCGACGGCGCCGCGGACATGATGGAGGAGGTGTCCTCGTTC
TCCGGGGACCAGCTGGTGCCTCACGCGGCGATGACGTCACCACACCCCACCAGCGACACC
ATCCGGGAGGTGGTGCAGACCGTGGACTCTACACAAGTGCAGCCGGAAGTGTCGGAGGTG
ATGGCGCGTCCCATAACAGTTCACCCTCACACTGTGGTGCTGAAGTACCACAAGAAGATA
CCACCCTTCAGGGAGACCATAGCCGGTCGTATGTCAGCATCTTCCCTGGTGGACCTGTCC
GTGTCCCGGGCCCGCCTGTCTCGCTGGTGTGGCCGGCCGGGGGTCATGGTGGTACACTCC
ACCACAGCCGCAGCCGACCACCTCCCACCAGCGTCGGACCTGGGAGACCTAGGGCTGTAC
GTGTCGGGGCGGGCGGAGCACGACTGGAGCGACCAAGTGCTGCTGAGGGTGGCCTTCGGA
GCGCCGGAGGGGACTGCGGCCATGGAGTGCCTGTCACGCCAGCTGAACAGCCTGCTGGAG
TGTTCCGACACGGATACTACACGACCGATCTGTCCTCGCCTCGTCGTGCGACAGGAACCT
CTCCAGAGGAGGAGACTCCTCGCTAAGCTGCTGGAGCACGCCAAGGTGGCTGAGGACTAT
AAACCCAAGTTCGGCGTGTCAGGACAGTACTGCGTCCAGGTGTGGAAGCTGTGTGAGGCG
CTGTGGGGGCTGGACCTGGAGAATGATGGTGTTCCGGGTAACACGGAGCAGTATGTGGTG
TCTCAGCACCAGCGGCTGGTGGAGTGGCTGAAGGAGGTGGTGCAGCGGTCCACGGACGAG
GAGCTGGAGCAGCCCGGAGACCTGGAAGATATTGATGAGTACGACGCTCACAGCAGCAAG
GTGTGGTGGCTGGTGGTAGGTGGTAGGATCCTGGAGGCCTGCAAGCTCGCCAGGGACAAG
GGAGACCTCAACATGGCCGCTATCATAACACAGGCCAGCGGTGACCCGGCCTTCAAGAGC
CTCTTGGAGCGCCAGCTGCGAGTGTGGAGGGAGTGCGGGGCGGAGGGGCTGGTGGCGGAG
TCGCGGCGGGCCACCATCAGTCTCCTGGCGGGACTACGCCCCCGAGGGTACTTCGAGAAG
TGCGACTGGCTAAGAGTACTGCTGGCGGTCGCCTGCTACATCTGCCCGCAGGTGCCGACC
CTGGAACAGATCCTGCACACGTACGAGAGCTACCTCACGGACGACGAGATGAGCGTGCAG
CATCCGCGACCCGCCTACCAGGACCGATACGACGCTCGGCTGGATAACAACCCCTCTCCG
TGGCGCGACCTCCGCTACGAGCTGCTGAAGGCCAGGGCCACCCAGAGCCGGCCGCGGACC
GACACGCACACCTACACACCGGACACGATGGACTGTTCCCTGAGCTTCCTGGTGGGGTCG
TGGCTGGGCGTGTCGTCTTCCAGCAGTGTCACGGGAACAGCTGAACAGCTGGAGGCCGCC
GGCAGCTGGCACCTGGCCGTGCAGGTGTTGGCCTACCTTCCCGACGACACACTGCGAGGT
CATCTCATCCGTCAAGTGCTGAACCGCAACGCGCCCTCCAAATTCGAGGGTCCAGTGGAC
GAGGAGCGCCTGGCTCTGATGAAGAGGCTGAGGATACCTCACACCTGGCTGTTGGCGGCA
CAAGCCTGGAGAGCCAAGTATGAGCACAAGCCGCTGCTTCAAGCTGAACACCTGGTGGCC
GCCCAGGAGTGGACGGAGGCTCACCGTGTGCTGGTCGAGGAACTGCTCACTGGTGCCGTG
CTCTCCGACAAGCTGTCGAGCATCTCGGGCGTGGTGTGCGAGCTGAGCGCCGCGTCGCGC
CAGCACCTGGTCCGCGGCTGGAGCCCCGCCGCGGACGCGCTCACACACTACCTGCGCCTG
TGCGAGGAGATCCGAGAAGTGGTAAACGCGGGGGGAGCCGCCGCCGGGGACGGGCTGAAG
GCGCTCCGCCCCTCCCTGACAGCCGCATGTAGGGCTCTGGCACAGTTTGAACCCAGGAGT
CCGAAGCAGGCGGCGGCTCACTCGGAGATGGGCGCCCGGCTGGTGCAGCTGTCTCTCGCG
GGAGGCCGGCCCGCGCCCCACATGGCGGCCCTGCTGGCGGCCCTCAGACTGCCCCCGGAC
TGCGCCGCCGCCGCCGCCACTAAGATAGCGACCGACCTCGCGGAACGAGCCTCGGAGGTG
TGTCTGGAGTCGGCCGTGAGGAACTAG
Protein sequence:
MDFTEDGDQNSLYQDGGVCVKSPTSELARLEHRGSHRLQLMKASLYADGAADMMEEVSSF
SGDQLVPHAAMTSPHPTSDTIREVVQTVDSTQVQPEVSEVMARPITVHPHTVVLKYHKKI
PPFRETIAGRMSASSLVDLSVSRARLSRWCGRPGVMVVHSTTAAADHLPPASDLGDLGLY
VSGRAEHDWSDQVLLRVAFGAPEGTAAMECLSRQLNSLLECSDTDTTRPICPRLVVRQEP
LQRRRLLAKLLEHAKVAEDYKPKFGVSGQYCVQVWKLCEALWGLDLENDGVPGNTEQYVV
SQHQRLVEWLKEVVQRSTDEELEQPGDLEDIDEYDAHSSKVWWLVVGGRILEACKLARDK
GDLNMAAIITQASGDPAFKSLLERQLRVWRECGAEGLVAESRRATISLLAGLRPRGYFEK
CDWLRVLLAVACYICPQVPTLEQILHTYESYLTDDEMSVQHPRPAYQDRYDARLDNNPSP
WRDLRYELLKARATQSRPRTDTHTYTPDTMDCSLSFLVGSWLGVSSSSSVTGTAEQLEAA
GSWHLAVQVLAYLPDDTLRGHLIRQVLNRNAPSKFEGPVDEERLALMKRLRIPHTWLLAA
QAWRAKYEHKPLLQAEHLVAAQEWTEAHRVLVEELLTGAVLSDKLSSISGVVCELSAASR
QHLVRGWSPAADALTHYLRLCEEIREVVNAGGAAAGDGLKALRPSLTAACRALAQFEPRS
PKQAAAHSEMGARLVQLSLAGGRPAPHMAALLAALRLPPDCAAAAATKIATDLAERASEV
CLESAVRN