New model in OGS2.0 | DPOGS214418  |
---|---|
Genomic Position | scaffold1945:- 19310-25786 |
See gene structure | |
CDS Length | 1524 |
Paired RNAseq reads   | 2158 |
Single RNAseq reads   | 5647 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011351 (8e-179) |
Best Drosophila hit   | pendulin (5e-91) |
Best Human hit | importin subunit alpha-2 (4e-103) |
Best NR hit (blastp)   | PREDICTED: similar to importin alpha 1a [Tribolium castaneum] (5e-130) |
Best NR hit (blastx)   | PREDICTED: similar to importin alpha 1a [Tribolium castaneum] (1e-112) |
GeneOntology terms    | GO:0005488 binding GO:0005737 cytoplasm GO:0008565 protein transporter activity GO:0005634 nucleus GO:0006606 protein import into nucleus GO:0005643 nuclear pore GO:0006886 intracellular protein transport |
InterPro families    | IPR000225 Armadillo IPR002652 Importin-alpha-like, importin-beta-binding domain IPR016024 Armadillo-type fold IPR011989 Armadillo-like helical |
Orthology group | MCL40628 |
Nucleotide sequence:
ATGTCCGACGGAGTTAATAGATCACGTTTAGCGTCCTACAAAAATGCCGGCCAAGGAGTT
ACAGAGCTTCGTCGTAAGAGAGCTGAATTGAGCGTCTCCCTACGTAAACAGGCTCGTGAT
GAACAGCTTCTTAAGAGGCGTGCCATGTCTCCTGAAGCGGGAGAGGAGCCAGAAACAGAA
AAGGTCATGACACCAAGTGAAATAGTCCAGGGTTTGAAGTCATCCGATCTATCGGTGAAG
ACTGCATCGGCTAGAGCTGCTCGTCGGATGTTGTCCAGAGAACAGAACCCTCCTATTACG
GTGATGGTTAATGCTGGTGTTATACAGCCCTTGGTCAGCTCGTTGGATAGAGATGATTGT
CCTGATCTTCAGTTTGAGGCGGCTTGGGCCATCACTAACATTGCGTCTGGGACCCATGAT
CATACGTTGGCTGTTATAGAAGGTGGTGCAATCCCGAAATTGGTGAATCTTCTATCAGCT
GGTGGTGCTGTGGGGGAACAGAGCGCGTGGGCCCTTGGTAACATCGCTGGCGACGGGCCC
ATACCCCGCGACTCAGTACTGGCAGCCTCAGCATTACCCGCCTTGCTACCTCACCTCTCG
ATTGGAGCGCCGCCCGCCACTCTCAGAACAGCCGTTTGGACCTATAGCAATCTCTGCAGG
AACAAAAATCCACTCGTCCGCTTCGAGTTAGTATCTCCCGCGCTGCCTGCTATATCTGAA
CTACTAACGGTCGCTGATCAGGACGTGTTGGCGGATGCATGCTGGGCGCTATCTTATTTA
ACCGACGGGCCTGATGAGAGGATTGAGGCGGTGCAGAGCACTCCGCACCTCCTTGGAAGG
CTCGTCTCCTTGCTATCTCACCGAGCGGCATCAGTTAGGACACCAGCGCTGAGAGCTGTG
GGTAACATGCTGACCGGCTCAGACAGACAGACGGATAGGGTCTTGGAGGCTGGATGTCTC
GATCCATTGGCGACGCTCCTGAAATGCGGCAGATCCTCGCTGGTGAAGGAGGCCGCTTGG
GCGTTGTCCAACGTGTTCGCTGGTACGAGCCAGCAGATACAGATAGCTATCGATTCTGGT
GTCTTACCAGTCTTAGTGTCTGTTTTATCTGCGGATGATGCTAAGTGTCAGAAGGAGGCT
GCGTGGGCTATCAGCAATGTGTGTCTGGGTGGAACACCAGCTCAGTTAGACAGGCTGATA
GGGGCCGGGTTTCTGGAGCCCTACTGTGCGCTGTTGGAGGCGCCCGATCAGCGCACGGTC
GCTGTAGTATTGGATGGTCTCGCTCATTTGCTCCAGGCGGCAGCGAAATTCGGTCAAGTG
GATCCTCTCTGTGTGAAGCTAGAGGAGGTTGGAGCCCTGGACCGCATCGAGGGACTCCAA
CAACACGAGAATGAACAGATCTACCGCAAAGCCTTGCATATCCTCGACACATACTTCGTG
GACCAGGAAGATCAGTCCCAGCCGGAGCAGATTGGTGATGAGTACCACTTCAGTGCCCAC
GACGACCAACAAATACAATTCTAA
Protein sequence:
MSDGVNRSRLASYKNAGQGVTELRRKRAELSVSLRKQARDEQLLKRRAMSPEAGEEPETE
KVMTPSEIVQGLKSSDLSVKTASARAARRMLSREQNPPITVMVNAGVIQPLVSSLDRDDC
PDLQFEAAWAITNIASGTHDHTLAVIEGGAIPKLVNLLSAGGAVGEQSAWALGNIAGDGP
IPRDSVLAASALPALLPHLSIGAPPATLRTAVWTYSNLCRNKNPLVRFELVSPALPAISE
LLTVADQDVLADACWALSYLTDGPDERIEAVQSTPHLLGRLVSLLSHRAASVRTPALRAV
GNMLTGSDRQTDRVLEAGCLDPLATLLKCGRSSLVKEAAWALSNVFAGTSQQIQIAIDSG
VLPVLVSVLSADDAKCQKEAAWAISNVCLGGTPAQLDRLIGAGFLEPYCALLEAPDQRTV
AVVLDGLAHLLQAAAKFGQVDPLCVKLEEVGALDRIEGLQQHENEQIYRKALHILDTYFV
DQEDQSQPEQIGDEYHFSAHDDQQIQF