| New model in OGS2.0 | DPOGS214397 |
|---|---|
| Genomic Position | scaffold1945:+ 3179-16375 |
| See gene structure | |
| CDS Length | 1797 |
| Paired RNAseq reads | 2928 |
| Single RNAseq reads | 7895 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011350 (0.0) |
| Best Drosophila hit | CG1887 (5e-153) |
| Best Human hit | scavenger receptor class B member 1 isoform 1 (4e-46) |
| Best NR hit (blastp) | PREDICTED: similar to CG1887-PA [Apis mellifera] (4e-177) |
| Best NR hit (blastx) | GK12615 [Drosophila willistoni] (9e-175) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0006952 defense response GO:0005887 integral to plasma membrane GO:0016020 membrane GO:0007155 cell adhesion |
| InterPro families | IPR002159 CD36 antigen |
| Orthology group | MCL16152 |
Nucleotide sequence:
ATGAGCAAAAAAAGCTATGATCTGTTCCAAGGGCGTCTCGCTGTTATAACTTTCAGCATA
GCAACAGTGGTTCTTGGCGTGATACTGTCGTTCGTACCCTGGCTCGACTATATCATATTT
AAGGAATTGAAATTATGGAATGGGTCGTTGAGTTACAGCTATTGGCAAAGACCTGGTGTC
ATCAGGCTGACCAAGGTCTACATCTTCAATGTCACCAACCCTCAAGGGTTCCTGGAGAAT
GGGGAGAAACCGAAACTCACTGAAATAGGCCCTTTTGTGTACAGGGAGGACATGGAGAAA
GTTAATATAAAATTCCACGACAACGACACTGTCACCTACCAGCACAACAAGATACTACGC
TTCGTGCCTGAACTGTCGGTGGACAAAAATCTGAAGCTGGTCGTGCCAAACATACCTCTC
CTGACAGTAACCTCGTTCTCTCCGAATCTCGCTGGCTGGCTTTTCAATCTCCTAGCCACC
GGCCTCTCGATAACTTACAGAGAGCGAGCCAAACCTTTCGTCCACGTGACTGCTGAACAA
CTGGTCTTTGGTTACGACGATCCGTTAGTCACTCTCGCTCATTACTTCTACCCAAAAGGA
AAGAGACCTAACACACAAATGGGGCTCCTGCTTGCTAGGAACGGTACTCTAGAGGAGGTG
TCCACGATACATACCGGAGAGGACATGGAAAGTTTTGGATATTTAGATCGCATCAATGGT
ATGGACCATCTGCCCCATTGGAGCGATAAACCCTGTAATGACATAAGAGCCTCCGAGGGT
TCCTTCTTCCCGCCGCGTCTGTCAACCAAAGCGGACACTGTCTATGTTTACGACAAAGAT
TTGTGCAGAATACTTCCGTTCACCTACAGGAAGGATGTATACATAAATGGTATACAAACT
GGTCTCTACACTCCACCAAACTCGACCTTCGAGAGCGCAGACGTGAATCCTGACAACAAA
TGTTTCTGCCAAGGAGAGAAATGTCCTCCGCGTGGTCTACAAAATATCAGCCCCTGTCAA
TACAACGCTCCCGTTTATTTGTCCTACCCTCACTTCTACGATGCTGAGCCGTCGTTGCTG
GAACGCTTCGAAGGACTTAAGCCAGAGCAAAACAAACACGAGAGCTACTTCTACATACAG
CCGAAAATCGGCGTGCCTCTGGAAGGTCAAGTTCGTGTCCAACTCAACCTGAAGGTGGAC
CGCGCTCCCAACATCATGGTTAACGACATTCACAAATTCCCAGACATTATATTTCCTATT
ATGTGGGTCCAAGAGGGTATTGAGGGCGTCAGCACGCCGATTTGGCGATGGATATTCCTC
GCCACAACCTTCGGCCCGATCGCTGCACCCATCATATCCTACTCTCTGATAGTCTTCGGT
CTTGCCATTCTCATACACGCCTTCATAAAGGCATATAAAAACATCGTCATAGGCCAAAAT
TCCTTAGAAATAGTTGAAATAGGAAGAGAAACTATTAGAAGGAGTTCTACACTCCTAATG
AACAGCTCCCAAAAACTTTTGGCACACAAAGAAACGTCATACAGACCTCTGAGCCAGTCC
ACTCCCTCATCCGCCCACGGCAGTCAGGAGGGTAGGCTGCAGGAGCTCAATTATATCGAT
AAAACGGACAATATAAGTCAGAGTATCGATGAATTGAAATCGATACTCAATAGGGATTTC
GTGAAAACAAATTTCTGTGAAACAGAAAAAGAATCGCTGATACATTCGGATAACGCTTTC
ATAGTATCCGAACATCGTCGATGTAGAGTTTTTAAAGTGCCTGATAGTTATTATTGA
Protein sequence:
MSKKSYDLFQGRLAVITFSIATVVLGVILSFVPWLDYIIFKELKLWNGSLSYSYWQRPGV
IRLTKVYIFNVTNPQGFLENGEKPKLTEIGPFVYREDMEKVNIKFHDNDTVTYQHNKILR
FVPELSVDKNLKLVVPNIPLLTVTSFSPNLAGWLFNLLATGLSITYRERAKPFVHVTAEQ
LVFGYDDPLVTLAHYFYPKGKRPNTQMGLLLARNGTLEEVSTIHTGEDMESFGYLDRING
MDHLPHWSDKPCNDIRASEGSFFPPRLSTKADTVYVYDKDLCRILPFTYRKDVYINGIQT
GLYTPPNSTFESADVNPDNKCFCQGEKCPPRGLQNISPCQYNAPVYLSYPHFYDAEPSLL
ERFEGLKPEQNKHESYFYIQPKIGVPLEGQVRVQLNLKVDRAPNIMVNDIHKFPDIIFPI
MWVQEGIEGVSTPIWRWIFLATTFGPIAAPIISYSLIVFGLAILIHAFIKAYKNIVIGQN
SLEIVEIGRETIRRSSTLLMNSSQKLLAHKETSYRPLSQSTPSSAHGSQEGRLQELNYID
KTDNISQSIDELKSILNRDFVKTNFCETEKESLIHSDNAFIVSEHRRCRVFKVPDSYY